RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 SLC20A1Q8WUM9 679 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 KBTBD7Q8WVZ9 684 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 SYN2Q92777 582 aaPredicted RBP8.69□□□□□ -1.02
GPN3-207ENST00000550228 JAKMIP2Q96AA8 810 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 TRIM44Q96DX7 344 aaPredicted RBP8.69□□□□□ -1.02
GPN3-207ENST00000550228 FAXDC2Q96IV6 333 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 SUSD3Q96L08 255 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 B3GALT6Q96L58 329 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 TWNKQ96RR1 684 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 RAD9AQ99638 391 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 CHP1Q99653 195 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 ELOVL4Q9GZR5 314 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 KCNF1Q9H3M0 494 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 HAUS4Q9H6D7 363 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 SEPT11Q9NVA2 429 aaKnown RBP8.69□□□□□ -1.02
GPN3-207ENST00000550228 AIPL1Q9NZN9 384 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 BARX2Q9UMQ3 279 aaPredicted RBP8.69□□□□□ -1.02
GPN3-207ENST00000550228 INSL6Q9Y581 213 aa8.69□□□□□ -1.02
GPN3-207ENST00000550228 CEP290O15078 2479 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 ARHGEF37A1IGU5 675 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 M0QZQ0 153 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 THAP12O43422 761 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 TRAPPC3O43617 180 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 TACC1O75410 805 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 MYOGP15173 224 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 WARSP23381 471 aaKnown RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 PAX3P23760 479 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 BRD2P25440 801 aaKnown RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 GNA15P30679 374 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 HNRNPH3P31942 346 aaKnown RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 GNL1P36915 607 aaPredicted RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 CDR1P51861 262 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 ZNF132P52740 706 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 RAD23BP54727 409 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 PSMC1P62191 440 aaKnown RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 CCZ1BP86790 482 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 CCZ1P86791 482 aaPredicted RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 PTK2Q05397 1052 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 INCA1Q0VD86 236 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 MTF1Q14872 753 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 MEA1Q16626 185 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 FAM171A1Q5VUB5 890 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 HGSNATQ68CP4 663 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 CYP26C1Q6V0L0 522 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 IRF2BP2Q7Z5L9 587 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 ACOT1Q86TX2 421 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 NOP9Q86U38 636 aaKnown RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 SLC47A2Q86VL8 602 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 TMTC1Q8IUR5 882 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 TMEM139Q8IV31 216 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 FMNL3Q8IVF7 1028 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 SLC39A11Q8N1S5 342 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 TMEM86AQ8N2M4 240 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 TTC39CQ8N584 583 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 SLC4A11Q8NBS3 891 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 CCDC112Q8NEF3 446 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 TMEM169Q96HH4 297 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 HEXIM2Q96MH2 286 aaKnown RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 GDF15Q99988 308 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.68□□□□□ -1.02
GPN3-207ENST00000550228 NT5C1AQ9BXI3 368 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 GPR62Q9BZJ7 368 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 PDCL3Q9H2J4 239 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 DPEP3Q9H4B8 488 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 AAASQ9NRG9 546 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 DDX43Q9NXZ2 648 aaKnown RBP8.68□□□□□ -1.02
GPN3-207ENST00000550228 SPG21Q9NZD8 308 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 ARHGAP20Q9P2F6 1191 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 PCDHB8Q9UN66 801 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 NME7Q9Y5B8 376 aa8.68□□□□□ -1.02
GPN3-207ENST00000550228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.68□□□□□ -1.02
GPN3-207ENST00000550228 SF3B1O75533 1304 aaKnown RBP eCLIP8.68□□□□□ -1.026e-10■■■■■ 187.2
GPN3-207ENST00000550228 LINC01553A4QN01 128 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 AKR1B10O60218 316 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 CSPG5O95196 566 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 MMEP08473 750 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 CYP11B1P15538 503 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 TYMPP19971 482 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 TNFAIP3P21580 790 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 FECHP22830 423 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 LMO2P25791 158 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 CA8P35219 290 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 CTNNB1P35222 781 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 MYH10P35580 1976 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 PRKCIP41743 596 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 LHX1P48742 406 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 BPIFB4P59827 614 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 ELAVL2Q12926 359 aaKnown RBP8.67□□□□□ -1.02
GPN3-207ENST00000550228 CCDC142Q17RM4 750 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 OVOS1Q6IE37 1185 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 RAD9BQ6WBX8 426 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 TAS1R1Q7RTX1 841 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 ZNF571Q7Z3V5 609 aaPredicted RBP8.67□□□□□ -1.02
GPN3-207ENST00000550228 LIMS2Q7Z4I7 341 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 SP7Q8TDD2 431 aaPredicted RBP8.67□□□□□ -1.02
GPN3-207ENST00000550228 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms