RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 IKBKBO14920 756 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 CLSTN1O94985 981 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 CCNE1P24864 410 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 ATICP31939 592 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 FKBP3Q00688 224 aaKnown RBP27.87■■■□□ 2.05
CPSF6-205ENST00000550075 MYL7Q01449 175 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 TSPY1Q01534 308 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 ADCY1Q08828 1119 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 CAMK4Q16566 473 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 ADGRF2Q8IZF7 708 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 PDCL2Q8N4E4 241 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 CLSTN2Q9H4D0 955 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 WDR6Q9NNW5 1121 aaKnown RBP27.87■■■□□ 2.05
CPSF6-205ENST00000550075 KIAA1468Q9P260 1216 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 POLIQ9UNA4 740 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 USTQ9Y2C2 406 aa27.87■■■□□ 2.05
CPSF6-205ENST00000550075 CCL16O15467 120 aa27.86■■■□□ 2.05
CPSF6-205ENST00000550075 STAU1O95793 577 aaKnown RBP27.86■■■□□ 2.05
CPSF6-205ENST00000550075 OR4Q2P0C623 313 aa27.86■■■□□ 2.05
CPSF6-205ENST00000550075 TNNC1P63316 161 aa27.86■■■□□ 2.05
CPSF6-205ENST00000550075 SMARCB1Q12824 385 aa27.86■■■□□ 2.05
CPSF6-205ENST00000550075 TDRD10Q5VZ19 366 aaKnown RBP27.86■■■□□ 2.05
CPSF6-205ENST00000550075 RNF19BQ6ZMZ0 732 aa27.86■■■□□ 2.05
CPSF6-205ENST00000550075 OTOP3Q7RTS5 596 aa27.86■■■□□ 2.05
CPSF6-205ENST00000550075 ZNF516Q92618 1163 aa27.86■■■□□ 2.05
CPSF6-205ENST00000550075 ACSF2Q96CM8 615 aaPredicted RBP27.86■■■□□ 2.05
CPSF6-205ENST00000550075 INSL5Q9Y5Q6 135 aa27.86■■■□□ 2.05
CPSF6-205ENST00000550075 BICDL2A1A5D9 508 aa27.85■■■□□ 2.05
CPSF6-205ENST00000550075 SLC16A3O15427 465 aaKnown RBP27.85■■■□□ 2.05
CPSF6-205ENST00000550075 LHX1P48742 406 aa27.85■■■□□ 2.05
CPSF6-205ENST00000550075 PLD1Q13393 1074 aa27.85■■■□□ 2.05
CPSF6-205ENST00000550075 DCP1BQ8IZD4 617 aaKnown RBP27.85■■■□□ 2.05
CPSF6-205ENST00000550075 ELMOD1Q8N336 334 aa27.85■■■□□ 2.05
CPSF6-205ENST00000550075 OR10T2Q8NGX3 314 aa27.85■■■□□ 2.05
CPSF6-205ENST00000550075 ZCWPW1Q9H0M4 648 aa27.85■■■□□ 2.05
CPSF6-205ENST00000550075 LMBRD1Q9NUN5 540 aa27.85■■■□□ 2.05
CPSF6-205ENST00000550075 C5orf42Q9H799 3197 aa27.85■■■□□ 2.05
CPSF6-205ENST00000550075 STX10O60499 249 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 PCSK1P29120 753 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 DLG4P78352 724 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 NCOA4Q13772 614 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 ZNF699Q32M78 642 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 ZACNQ401N2 412 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 ANKRD40Q6AI12 368 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 KLHL10Q6JEL2 608 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 FOXR2Q6PJQ5 311 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 C2orf15Q8WU43 125 aaKnown RBP27.84■■■□□ 2.05
CPSF6-205ENST00000550075 MMS19Q96T76 1030 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 NUP62CLQ9H1M0 184 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 CD320Q9NPF0 282 aa27.84■■■□□ 2.05
CPSF6-205ENST00000550075 MTMR11A4FU01 709 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 SEC24AO95486 1093 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 CST3P01034 146 aaPredicted RBP27.83■■■□□ 2.05
CPSF6-205ENST00000550075 C4BPAP04003 597 aaKnown RBP27.83■■■□□ 2.05
CPSF6-205ENST00000550075 SP100P23497 879 aaPredicted RBP27.83■■■□□ 2.05
CPSF6-205ENST00000550075 MYL6P60660 151 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 WDR72Q3MJ13 1102 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 SLC39A12Q504Y0 691 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 ZC3H3Q8IXZ2 948 aaKnown RBP27.83■■■□□ 2.05
CPSF6-205ENST00000550075 PLCD3Q8N3E9 789 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 PGLYRP2Q96PD5 576 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 RTP3Q9BQQ7 232 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 DDX43Q9NXZ2 648 aaKnown RBP27.83■■■□□ 2.05
CPSF6-205ENST00000550075 HSFX1Q9UBD0 423 aa27.83■■■□□ 2.05
CPSF6-205ENST00000550075 TRIM49BA6NDI0 452 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 CD44P16070 742 aaKnown RBP27.82■■■□□ 2.04
CPSF6-205ENST00000550075 PIK3CAP42336 1068 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 SOWAHAQ2M3V2 549 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 SCARA3Q6AZY7 606 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 SV2AQ7L0J3 742 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 FEZF2Q8TBJ5 459 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 NELFBQ8WX92 580 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 TMEM209Q96SK2 561 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 ACBD6Q9BR61 282 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 IMPG2Q9BZV3 1241 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 VRTNQ9H8Y1 702 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 CTNND2Q9UQB3 1225 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 YIPF1Q9Y548 306 aa27.82■■■□□ 2.04
CPSF6-205ENST00000550075 C2CD4DB7Z1M9 353 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 TRIM49P0CI25 452 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 TRIM49CP0CI26 452 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 P4HA1P13674 534 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 BMP6P22004 513 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 GTF2H1P32780 548 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 PMS1P54277 932 aaKnown RBP27.81■■■□□ 2.04
CPSF6-205ENST00000550075 PAK1Q13153 545 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 NFE2Q16621 373 aaPredicted RBP27.81■■■□□ 2.04
CPSF6-205ENST00000550075 ZNF667Q5HYK9 610 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 GRASPQ7Z6J2 395 aaPredicted RBP27.81■■■□□ 2.04
CPSF6-205ENST00000550075 SPPL2BQ8TCT7 592 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 TAF4BQ92750 862 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 EEF2KMTQ96G04 330 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 CEP63Q96MT8 703 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 XYLT2Q9H1B5 865 aa27.81■■■□□ 2.04
CPSF6-205ENST00000550075 PPP1R3GB7ZBB8 358 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 GABRDO14764 452 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 FAM163BP0C2L3 166 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 WARSP23381 471 aaKnown RBP27.8■■■□□ 2.04
CPSF6-205ENST00000550075 FSHRP23945 695 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 GBP2P32456 591 aaPredicted RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms