RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 KIAA0355O15063 1070 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 TIMP1P01033 207 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 FTLP02792 175 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-213ENST00000550064 CYP1A1P04798 512 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-213ENST00000550064 UNGP13051 313 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-213ENST00000550064 CD19P15391 556 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 BRD2P25440 801 aaKnown RBP12.92□□□□□ -0.34
CACNB3-213ENST00000550064 SSTR3P32745 418 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-213ENST00000550064 RFC2P35250 354 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 TTC3P53804 2025 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 UPP1Q16831 310 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 NOMO2Q5JPE7 1267 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 ZNF569Q5MCW4 686 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 ACAD10Q6JQN1 1059 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 C3orf58Q8NDZ4 430 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 URGCPQ8TCY9 931 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 ZNF592Q92610 1267 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-213ENST00000550064 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
CACNB3-213ENST00000550064 PAAF1Q9BRP4 392 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 PRDM5Q9NQX1 630 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-213ENST00000550064 SALL4Q9UJQ4 1053 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
CACNB3-213ENST00000550064 MICAL3Q7RTP6 2002 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 ANKRD62A6NC57 917 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 CYB561D2O14569 222 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 HUS1O60921 280 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 TACC1O75410 805 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 MOCS3O95396 460 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 TMEM253P0C7T8 217 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 ITGB8P26012 769 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 GATMP50440 423 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 CNKSR3Q6P9H4 555 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 CD300LGQ6UXG3 332 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 TRIM72Q6ZMU5 477 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 ZNF280BQ86YH2 543 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 PASD1Q8IV76 773 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 CRIPAKQ8N1N5 446 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 SLC35F6Q8N357 371 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 TOP6BLQ8N6T0 577 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 APPL2Q8NEU8 664 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 OR6B3Q8NGW1 331 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 KBTBD7Q8WVZ9 684 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 SECISBP2LQ93073 1101 aaKnown RBP12.91□□□□□ -0.34
CACNB3-213ENST00000550064 CYFIP2Q96F07 1278 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 SENP8Q96LD8 212 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 HEXIM2Q96MH2 286 aaKnown RBP12.91□□□□□ -0.34
CACNB3-213ENST00000550064 UROC1Q96N76 676 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 WDR24Q96S15 920 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 NT5C1AQ9BXI3 368 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 TBC1D13Q9NVG8 400 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 KANSL3Q9P2N6 904 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 MYO1AQ9UBC5 1043 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 PCDHGC3Q9UN70 934 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 NME7Q9Y5B8 376 aa12.91□□□□□ -0.34
CACNB3-213ENST00000550064 FANCGO15287 622 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 BUB1O43683 1085 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 B4GALT3O60512 393 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 DDHD2O94830 711 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 FAM163BP0C2L3 166 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 VDRP11473 427 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 RAG1P15918 1043 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 ABCB4P21439 1286 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 WARSP23381 471 aaKnown RBP12.9□□□□□ -0.34
CACNB3-213ENST00000550064 GNL1P36915 607 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-213ENST00000550064 NOMO3P69849 1222 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 DSC1Q08554 894 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 IKBKEQ14164 716 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 NAA35Q5VZE5 725 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 DENND1BQ6P3S1 775 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 DCLRE1AQ6PJP8 1040 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 DSTYKQ6XUX3 929 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.9□□□□□ -0.34
CACNB3-213ENST00000550064 DPH6Q7L8W6 267 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 UNC93AQ86WB7 457 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 OSTM1Q86WC4 334 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 PDCL2Q8N4E4 241 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 RNF10Q8N5U6 811 aaKnown RBP12.9□□□□□ -0.34
CACNB3-213ENST00000550064 CPA5Q8WXQ8 436 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 CTNNBL1Q8WYA6 563 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-213ENST00000550064 ARHGEF26Q96DR7 871 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 THAP2Q9H0W7 228 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 SNX25Q9H3E2 840 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 KIAA1257Q9ULG3 409 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 MYH10P35580 1976 aa12.9□□□□□ -0.34
CACNB3-213ENST00000550064 BRCA2P51587 3418 aa12.9□□□□□ -0.35
CACNB3-213ENST00000550064 NCANO14594 1321 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 A0A0A6YYK5 440 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-213ENST00000550064 A8MXQ7 604 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 HOXA2O43364 376 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 MED7O43513 233 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 HCRTO43612 131 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 PDGFRBP09619 1106 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 LMO2P25791 158 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms