RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 WDR5BQ86VZ2 330 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 FAM160A2Q8N612 972 aaPredicted RBP10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 PGLYRP2Q96PD5 576 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 KCND2Q9NZV8 630 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 ANKFY1Q9P2R3 1169 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 SLC27A5Q9Y2P5 690 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 PCDHB6Q9Y5E3 794 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 TIMM13Q9Y5L4 95 aaPredicted RBP10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 KIF26AQ9ULI4 1882 aaPredicted RBP10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 MTMR11A4FU01 709 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 PP2D1A8MPX8 630 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 LACTBL1A8MY62 500 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 H0YCG3 227 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 DPYSL4O14531 572 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 GDF9O60383 454 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 OR4Q2P0C623 313 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 CXCL8P10145 99 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 SOX9P48436 509 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 TUFMP49411 452 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 SPAG1Q07617 926 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 GNL2Q13823 731 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 PTPAQ15257 358 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ST3GAL2Q16842 350 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ARHGAP15Q53QZ3 475 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 STXBP5Q5T5C0 1151 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 SPATA1Q5VX52 437 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ARMCX5Q6P1M9 558 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 DSTYKQ6XUX3 929 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 Q6ZS52 159 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ITIH5Q86UX2 942 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 GPIHBP1Q8IV16 184 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 CCDC83Q8IWF9 413 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 CD302Q8IX05 232 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ATAD1Q8NBU5 361 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 BPIFB1Q8TDL5 484 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ZSCAN31Q96LW9 406 aaPredicted RBP10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ATXN3LQ9H3M9 355 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 TASP1Q9H6P5 420 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 C2orf42Q9NWW7 574 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 THG1LQ9NWX6 298 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 GTSE1Q9NYZ3 720 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 LARSQ9P2J5 1176 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ZMYM5Q9UJ78 669 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 DENND4CQ5VZ89 1909 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 ANK1P16157 1881 aa10.7□□□□□ -0.7
TRAFD1-207ENST00000550051 SOBPA7XYQ1 873 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 PIRO00625 290 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 OGTO15294 1046 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 FAM189A1O60320 539 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 PIGRP01833 764 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 CYP11A1P05108 521 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 ZNF806P0C7X5 589 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 GABRR2P28476 465 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 TNFSF9P41273 254 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 RAP1GAPP47736 663 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 SLC12A3P55017 1021 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 NCKAP1LP55160 1127 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 PPP2R3AQ06190 1150 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 SMARCB1Q12824 385 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 PON2Q15165 354 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 ENOX2Q16206 610 aaKnown RBP10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 ITPRIPL2Q3MIP1 535 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 ARSHQ5FYA8 562 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 GPR158Q5T848 1215 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 HEATR6Q6AI08 1181 aaKnown RBP10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 CEP68Q76N32 757 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 TMEM130Q8N3G9 435 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 FAM184AQ8NB25 1140 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 FAM200AQ8TCP9 573 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 GAB3Q8WWW8 586 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 ZFYVE19Q96K21 471 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 ZC3H10Q96K80 434 aaKnown RBP10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 SENP8Q96LD8 212 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 DCBLD2Q96PD2 775 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 PNMA5Q96PV4 448 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 FAM83CQ9BQN1 747 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 SLC46A2Q9BY10 475 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 GKN1Q9NS71 199 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 SPAG17Q6Q759 2223 aa10.69□□□□□ -0.7
TRAFD1-207ENST00000550051 A0A0B4J269 797 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 ANO9A1A5B4 782 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 AXIN1O15169 862 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 ATG13O75143 517 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 AKAP3O75969 853 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 ODC1P11926 461 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 CDC25CP30307 473 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 MATR3P43243 847 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 SHC2P98077 582 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 TNK2Q07912 1038 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 RAD51AP2Q09MP3 1159 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 TMEM196Q5HYL7 178 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 PLA2G2CQ5R387 149 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 C9orf57Q5W0N0 161 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 IL31Q6EBC2 164 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 CACNA2D4Q7Z3S7 1137 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 TTC9BQ8N6N2 239 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 C2orf15Q8WU43 125 aaKnown RBP10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 CHAMP1Q96JM3 812 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms