RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ARL6IP4Q66PJ3 421 aaKnown RBP16.71■□□□□ 0.27
RAB5C-205ENST00000550013 SPEM1Q8N4L4 309 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 PSMG2Q969U7 264 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 MSANTD3Q96H12 275 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 LPIN3Q9BQK8 851 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 ATXN3LQ9H3M9 355 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 C8orf33Q9H7E9 229 aaPredicted RBP16.71■□□□□ 0.27
RAB5C-205ENST00000550013 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 C2orf42Q9NWW7 574 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 CPSF3Q9UKF6 684 aaKnown RBP16.71■□□□□ 0.27
RAB5C-205ENST00000550013 KIF3AQ9Y496 699 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 ASB3Q9Y575 518 aa16.71■□□□□ 0.27
RAB5C-205ENST00000550013 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.71■□□□□ 0.27
RAB5C-205ENST00000550013 MYBPHLA2RUH7 354 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 K7ESF4 209 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 HRO43593 1189 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 FAM13AO94988 1023 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 PRAMEF12O95522 483 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 CTHP32929 405 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 ZNF131P52739 623 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 CYP4F8P98187 520 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 MCM6Q14566 821 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 SLC39A12Q504Y0 691 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
RAB5C-205ENST00000550013 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 TSPAN18Q96SJ8 248 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 SEPT5Q99719 369 aaPredicted RBP16.7■□□□□ 0.26
RAB5C-205ENST00000550013 PARVGQ9HBI0 331 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 GTSE1Q9NYZ3 720 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 SDK1Q7Z5N4 2213 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 DENND4CQ5VZ89 1909 aa16.7■□□□□ 0.26
RAB5C-205ENST00000550013 ZNF638Q14966 1978 aaKnown RBP16.69■□□□□ 0.26
RAB5C-205ENST00000550013 TISP43B9A030 160 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 ANKRD63C9JTQ0 380 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 H3BQV1 296 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 PIRO00625 290 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 DPYSL4O14531 572 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 RETP07949 1114 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 ATF6P18850 670 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 GJB2P29033 226 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 NMT1P30419 496 aaKnown RBP16.69■□□□□ 0.26
RAB5C-205ENST00000550013 ACOT2P49753 483 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 TNK2Q07912 1038 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 SIM2Q14190 667 aaPredicted RBP16.69■□□□□ 0.26
RAB5C-205ENST00000550013 TMEM132DQ14C87 1099 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 PON2Q15165 354 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 ARHGAP29Q52LW3 1261 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 ERICH6BQ5W0A0 696 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 RALGPS2Q86X27 583 aaPredicted RBP16.69■□□□□ 0.26
RAB5C-205ENST00000550013 FAM200AQ8TCP9 573 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 CNTNAP3BQ96NU0 1288 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 FIZ1Q96SL8 496 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 RTKNQ9BST9 563 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 CNTNAP3Q9BZ76 1288 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 SMG9Q9H0W8 520 aaKnown RBP16.69■□□□□ 0.26
RAB5C-205ENST00000550013 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 IL21Q9HBE4 155 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 ATG2BQ96BY7 2078 aa16.69■□□□□ 0.26
RAB5C-205ENST00000550013 ANO9A1A5B4 782 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 TRAK2O60296 914 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 PAPSS2O95340 614 aaPredicted RBP16.68■□□□□ 0.26
RAB5C-205ENST00000550013 FGF19O95750 216 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 CYP11A1P05108 521 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 KRT18P05783 430 aaKnown RBP16.68■□□□□ 0.26
RAB5C-205ENST00000550013 PLCG1P19174 1290 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 UBA7P41226 1012 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 GRIN1Q05586 938 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 KARSQ15046 597 aaKnown RBP16.68■□□□□ 0.26
RAB5C-205ENST00000550013 MGAT5BQ3V5L5 792 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 ARHGAP15Q53QZ3 475 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 C1orf228Q6PIY5 440 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 ITIH5Q86UX2 942 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 CD302Q8IX05 232 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 GIPC2Q8TF65 315 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 CALML4Q96GE6 196 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 TMX3Q96JJ7 454 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 AK8Q96MA6 479 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 ZCWPW1Q9H0M4 648 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 IKZF4Q9H2S9 585 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 TASP1Q9H6P5 420 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 OBP2AQ9NY56 170 aa16.68■□□□□ 0.26
RAB5C-205ENST00000550013 KMT2BQ9UMN6 2715 aaPredicted RBP16.68■□□□□ 0.26
RAB5C-205ENST00000550013 OBSL1O75147 1896 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 CHD8Q9HCK8 2581 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 SLC26A4O43511 780 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 SCP2P22307 547 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 RABEP1Q15276 862 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 ZC2HC1CQ53FD0 456 aaPredicted RBP16.67■□□□□ 0.26
RAB5C-205ENST00000550013 DGKKQ5KSL6 1271 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.67■□□□□ 0.26
RAB5C-205ENST00000550013 LRRTM3Q86VH5 581 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 LONP2Q86WA8 852 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 BPIFB1Q8TDL5 484 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 RAD54LQ92698 747 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 PYM1Q9BRP8 204 aaKnown RBP16.67■□□□□ 0.26
RAB5C-205ENST00000550013 SEMA4GQ9NTN9 838 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 HSFX1Q9UBD0 423 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 DERAQ9Y315 318 aa16.67■□□□□ 0.26
RAB5C-205ENST00000550013 SPAG17Q6Q759 2223 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms