RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 MYH15Q9Y2K3 1946 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 HEPACAM2A8MVW5 462 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 KPNA7A9QM74 516 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 SPTLC2O15270 562 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 IL18RAPO95256 599 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 PSMC3P17980 439 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 GARTP22102 1010 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 TARSP26639 723 aaKnown RBP14.41□□□□□ -0.1
CPSF6-204ENST00000547486 GDI1P31150 447 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 HOXD13P35453 343 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 TFAMQ00059 246 aaKnown RBP14.41□□□□□ -0.1
CPSF6-204ENST00000547486 PLD1Q13393 1074 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 FOXD4L5Q5VV16 416 aaPredicted RBP14.41□□□□□ -0.1
CPSF6-204ENST00000547486 ZNF852Q6ZMS4 543 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 METTL23Q86XA0 190 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 BRSK2Q8IWQ3 736 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 SYCP3Q8IZU3 236 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 ADSSL1Q8N142 457 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 C1orf127Q8N9H9 656 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 FOXD4L4Q8WXT5 416 aaPredicted RBP14.41□□□□□ -0.1
CPSF6-204ENST00000547486 DNASE1L2Q92874 299 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 SNX21Q969T3 373 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 PSMG2Q969U7 264 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 LRRC3BQ96PB8 259 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 LPIN3Q9BQK8 851 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 MKNK1Q9BUB5 465 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 BCO2Q9BYV7 579 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 PCIF1Q9H4Z3 704 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 BRD9Q9H8M2 597 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 SPATA6Q9NWH7 488 aaPredicted RBP14.41□□□□□ -0.1
CPSF6-204ENST00000547486 DSEQ9UL01 958 aa14.41□□□□□ -0.1
CPSF6-204ENST00000547486 PPP6R2O75170 966 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 ATF6P18850 670 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 SHC4Q6S5L8 630 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 NT5DC4Q86YG4 428 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 ARID3BQ8IVW6 561 aaPredicted RBP14.4□□□□□ -0.1
CPSF6-204ENST00000547486 MFSD6LQ8IWD5 586 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 THEM5Q8N1Q8 247 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 IRF7Q92985 503 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 NELL2Q99435 816 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 SEPT5Q99719 369 aaPredicted RBP14.4□□□□□ -0.1
CPSF6-204ENST00000547486 GPR88Q9GZN0 384 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 SLITRK6Q9H5Y7 841 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 PDE11AQ9HCR9 933 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 TMLHEQ9NVH6 421 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 KBTBD4Q9NVX7 518 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 RBAKQ9NYW8 714 aaPredicted RBP14.4□□□□□ -0.1
CPSF6-204ENST00000547486 HSFX1Q9UBD0 423 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 AGAP1Q9UPQ3 857 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 ASB3Q9Y575 518 aa14.4□□□□□ -0.1
CPSF6-204ENST00000547486 ARNTLO00327 626 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 EXTL3O43909 919 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 LDHAP00338 332 aaKnown RBP14.39□□□□□ -0.11
CPSF6-204ENST00000547486 ITGB3P05106 788 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 GABRR2P28476 465 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 POLR2BP30876 1174 aaKnown RBP14.39□□□□□ -0.11
CPSF6-204ENST00000547486 TUFMP49411 452 aaKnown RBP14.39□□□□□ -0.11
CPSF6-204ENST00000547486 ALCAMQ13740 583 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 FOXD4L6Q3SYB3 417 aaPredicted RBP14.39□□□□□ -0.11
CPSF6-204ENST00000547486 MGAT5BQ3V5L5 792 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 SV2CQ496J9 727 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 FOXD4L3Q6VB84 417 aaPredicted RBP14.39□□□□□ -0.11
CPSF6-204ENST00000547486 CCDC65Q8IXS2 484 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 DEPDC1BQ8WUY9 529 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 DHX58Q96C10 678 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 ATXN3LQ9H3M9 355 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 TMEM206Q9H813 350 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 IL21Q9HBE4 155 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 TRPV5Q9NQA5 729 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 SIX4Q9UIU6 781 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 L1RE1Q9UN81 338 aa14.39□□□□□ -0.11
CPSF6-204ENST00000547486 PTPRZ1P23471 2315 aaPredicted RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 SCN1AP35498 2009 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 ZNF263O14978 683 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 LMNAP02545 664 aaKnown RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 HAPLN1P10915 354 aaPredicted RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 RPS9P46781 194 aaKnown RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 GPR158Q5T848 1215 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 CSGALNACT2Q8N6G5 542 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 FAM200AQ8TCP9 573 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 KCNG4Q8TDN1 519 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 NOC3LQ8WTT2 800 aaKnown RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 CACTINQ8WUQ7 758 aaKnown RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 ZNF396Q96N95 335 aaPredicted RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 SLC46A2Q9BY10 475 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 TRIM9Q9C026 710 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 TNMDQ9H2S6 317 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 SEMA4AQ9H3S1 761 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 NDRG2Q9UN36 371 aaKnown RBP14.38□□□□□ -0.11
CPSF6-204ENST00000547486 PTPRJQ12913 1337 aa14.38□□□□□ -0.11
CPSF6-204ENST00000547486 MAN2B1O00754 1011 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 LAMTOR5O43504 91 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 HCRTO43612 131 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 CUTAO60888 179 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 YEATS4O95619 227 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 HMGA1P17096 107 aaKnown RBP14.37□□□□□ -0.11
CPSF6-204ENST00000547486 ACAT1P24752 427 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms