RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 IQUBQ8NA54 791 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 ZSCAN18Q8TBC5 510 aaPredicted RBP24.53■■□□□ 1.52
CHD4-214ENST00000545942 CACTINQ8WUQ7 758 aaKnown RBP24.53■■□□□ 1.52
CHD4-214ENST00000545942 PSMG2Q969U7 264 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 TRIM9Q9C026 710 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 SLITRK6Q9H5Y7 841 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 BRD9Q9H8M2 597 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 TRPV4Q9HBA0 871 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 ANK1P16157 1881 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 A0A1W2PRU2 124 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 GOLGA8IPA6NC78 632 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 PRR23AA6NEV1 266 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 GOLGA8JA6NMD2 632 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 LRRN2O75325 713 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 SOAT2O75908 522 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 TUFMP49411 452 aaKnown RBP24.52■■□□□ 1.52
CHD4-214ENST00000545942 SMARCB1Q12824 385 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 SHC4Q6S5L8 630 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 ITIH5Q86UX2 942 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 C1orf210Q8IVY1 113 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 DHX58Q96C10 678 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 BCO2Q9BYV7 579 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 PCIF1Q9H4Z3 704 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 LTB4R2Q9NPC1 389 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 HEBP1Q9NRV9 189 aa24.52■■□□□ 1.52
CHD4-214ENST00000545942 FAM170BA6NMN3 283 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 KIAA0391O15091 583 aaKnown RBP24.51■■□□□ 1.51
CHD4-214ENST00000545942 ITGB3P05106 788 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 PSMC3P17980 439 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 CD72P21854 359 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 POLR2BP30876 1174 aaKnown RBP24.51■■□□□ 1.51
CHD4-214ENST00000545942 VITQ6UXI7 678 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 DNAJB7Q7Z6W7 309 aaPredicted RBP24.51■■□□□ 1.51
CHD4-214ENST00000545942 GPD1LQ8N335 351 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 C1orf127Q8N9H9 656 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 KCNG4Q8TDN1 519 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 NOC3LQ8WTT2 800 aaKnown RBP24.51■■□□□ 1.51
CHD4-214ENST00000545942 C2orf15Q8WU43 125 aaKnown RBP24.51■■□□□ 1.51
CHD4-214ENST00000545942 DEPDC1BQ8WUY9 529 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 IRF7Q92985 503 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 NELL2Q99435 816 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 SEPT5Q99719 369 aaPredicted RBP24.51■■□□□ 1.51
CHD4-214ENST00000545942 AGAP1Q9UPQ3 857 aa24.51■■□□□ 1.51
CHD4-214ENST00000545942 MTF2Q9Y483 593 aaPredicted RBP24.51■■□□□ 1.51
CHD4-214ENST00000545942 FGF19O95750 216 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 F13A1P00488 732 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 VIPR2P41587 438 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 ASIC1P78348 528 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 FOXD4L6Q3SYB3 417 aaPredicted RBP24.5■■□□□ 1.51
CHD4-214ENST00000545942 MGAT5BQ3V5L5 792 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 FOXD4L3Q6VB84 417 aaPredicted RBP24.5■■□□□ 1.51
CHD4-214ENST00000545942 ZNF852Q6ZMS4 543 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 SPPL2BQ8TCT7 592 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 E2F7Q96AV8 911 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 PDE11AQ9HCR9 933 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 ITGA11Q9UKX5 1188 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 MRPS17Q9Y2R5 130 aaKnown RBP24.5■■□□□ 1.51
CHD4-214ENST00000545942 TSC2P49815 1807 aa24.5■■□□□ 1.51
CHD4-214ENST00000545942 VEPH1Q14D04 833 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 CNNM4Q6P4Q7 775 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 LRRTM3Q86VH5 581 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 DCP1BQ8IZD4 617 aaKnown RBP24.49■■□□□ 1.51
CHD4-214ENST00000545942 CSGALNACT2Q8N6G5 542 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 LRRC52Q8N7C0 313 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 GLIS3Q8NEA6 775 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 FAM200AQ8TCP9 573 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 HPS3Q969F9 1004 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 MAGEF1Q9HAY2 307 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 ZNF334Q9HCZ1 680 aaPredicted RBP24.49■■□□□ 1.51
CHD4-214ENST00000545942 TRPV5Q9NQA5 729 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 SCN1AP35498 2009 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 COL4A3Q01955 1670 aa24.49■■□□□ 1.51
CHD4-214ENST00000545942 ZFHX2Q9C0A1 2572 aaPredicted RBP24.49■■□□□ 1.51
CHD4-214ENST00000545942 EIF3DO15371 548 aaKnown RBP eCLIP24.48■■□□□ 1.518e-7■□□□□ 10.8
CHD4-214ENST00000545942 NCAM2O15394 837 aa24.48■■□□□ 1.51
CHD4-214ENST00000545942 GDI1P31150 447 aa24.48■■□□□ 1.51
CHD4-214ENST00000545942 MAGEA9P43362 315 aa24.48■■□□□ 1.51
CHD4-214ENST00000545942 ATL3Q6DD88 541 aa24.48■■□□□ 1.51
CHD4-214ENST00000545942 GAREM2Q75VX8 874 aa24.48■■□□□ 1.51
CHD4-214ENST00000545942 MFSD6LQ8IWD5 586 aa24.48■■□□□ 1.51
CHD4-214ENST00000545942 LPIN3Q9BQK8 851 aa24.48■■□□□ 1.51
CHD4-214ENST00000545942 HEPACAM2A8MVW5 462 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 ZNF263O14978 683 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 HUS1O60921 280 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 KRT19P08727 400 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 TMEM191BP0C7N4 346 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 ATF6P18850 670 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 TARSP26639 723 aaKnown RBP24.47■■□□□ 1.51
CHD4-214ENST00000545942 GABRR2P28476 465 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 CDR1P51861 262 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 TSPY1Q01534 308 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 ARHGAP15Q53QZ3 475 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 PDCL2Q8N4E4 241 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 CXorf38Q8TB03 319 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 C7orf25Q9BPX7 421 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 MTMR12Q9C0I1 747 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 ATXN3LQ9H3M9 355 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 ABI2Q9NYB9 513 aaPredicted RBP24.47■■□□□ 1.51
CHD4-214ENST00000545942 L1RE1Q9UN81 338 aa24.47■■□□□ 1.51
CHD4-214ENST00000545942 DMDP11532 3685 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms