RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 MINDY1Q8N5J2 469 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 PIP4K2CQ8TBX8 421 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 HAS1Q92839 578 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 ACDQ96AP0 544 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 ZMAT2Q96NC0 199 aaKnown RBP16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 HNRNPABQ99729 332 aaKnown RBP16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 TASP1Q9H6P5 420 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 KCNMB3Q9NPA1 279 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 TBX20Q9UMR3 447 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 NUB1Q9Y5A7 615 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 NUP210Q8TEM1 1887 aaPredicted RBP16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 PYCARD-AS1I3L0S3 204 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 DGAT1O75907 488 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 GJA4P35212 333 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 ALDH1A3P47895 512 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 ARHGAP15Q53QZ3 475 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 C2orf27AQ580R0 203 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 CDCA2Q69YH5 1023 aaPredicted RBP16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 CCDC33Q8N5R6 958 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 DEFB119Q8N690 84 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 CCDC148Q8NFR7 591 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 OLIG1Q8TAK6 271 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 DDX12PQ92771 950 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 C18orf25Q96B23 403 aaPredicted RBP16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 CNOT6LQ96LI5 555 aaKnown RBP16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 SLC6A14Q9UN76 642 aa16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 TIMM13Q9Y5L4 95 aaPredicted RBP16.87■□□□□ 0.29
CLSTN3-216ENST00000545663 TRIP11Q15643 1979 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 WEE1P30291 646 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 P2RY2P41231 377 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 SEC13P55735 322 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 GFPT1Q06210 699 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 INF2Q27J81 1249 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 MOXD1Q6UVY6 613 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 DHX32Q7L7V1 743 aaKnown RBP16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 CEP120Q8N960 986 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 ATAD1Q8NBU5 361 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 BSNDQ8WZ55 320 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 USP13Q92995 863 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 PSMG2Q969U7 264 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 SUSD3Q96L08 255 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 FAM20AQ96MK3 541 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 TBC1D32Q96NH3 1257 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 ADPGKQ9BRR6 497 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 SLC26A6Q9BXS9 759 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 CAPN10Q9HC96 672 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 DACH1Q9UI36 760 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 PCDHB9Q9Y5E1 797 aa16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 TNRC6BQ9UPQ9 1833 aaKnown RBP16.86■□□□□ 0.29
CLSTN3-216ENST00000545663 TRABD2BA6NFA1 517 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 M0R2N6 131 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 ARHGAP6O43182 974 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 USO1O60763 962 aaKnown RBP16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 ITPKBP27987 946 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 OSTNP61366 133 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 PLD1Q13393 1074 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 LYSMD4Q5XG99 296 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 CENPPQ6IPU0 288 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 ALKAL1Q6UXT8 129 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 PIGOQ8TEQ8 1089 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 USP33Q8TEY7 942 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 DCBLD2Q96PD2 775 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 LPIN3Q9BQK8 851 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 CCDC113Q9H0I3 377 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 IL21Q9HBE4 155 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 POLMQ9NP87 494 aaPredicted RBP16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 DKK4Q9UBT3 224 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 PCDHA4Q9UN74 947 aa16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 USP9XQ93008 2570 aaPredicted RBP16.85■□□□□ 0.29
CLSTN3-216ENST00000545663 TEX15Q9BXT5 2789 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 CCDC196A0A1B0GTZ2 297 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 ACKR2O00590 384 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 MCM4P33991 863 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 RARRES1P49788 294 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 AMPD2Q01433 879 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 AKAP17AQ02040 695 aaKnown RBP16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 HNRNPDQ14103 355 aaKnown RBP16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 NTRK3Q16288 839 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 NT5DC1Q5TFE4 455 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 TMEM92Q6UXU6 159 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 TOGARAM2Q6ZUX3 1019 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 SCUBE3Q8IX30 993 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 CMTM8Q8IZV2 173 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 APPL2Q8NEU8 664 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 CD101Q93033 1021 aa16.84■□□□□ 0.29
CLSTN3-216ENST00000545663 ARHGAP33O14559 1287 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 SERPINF2P08697 491 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 PTPRBP23467 1997 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 RCAN1P53805 252 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 NBR1Q14596 966 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 DUOXA1Q1HG43 343 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 XKR4Q5GH76 650 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 PEAR1Q5VY43 1037 aaPredicted RBP16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 EIF2AK1Q9BQI3 630 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 ANKEF1Q9NU02 776 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 DNAAF2Q9NVR5 837 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 PCDHB8Q9UN66 801 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 ASB3Q9Y575 518 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms