RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 KANSL1LA0AUZ9 987 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 PRR23AA6NEV1 266 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 POLR2BP30876 1174 aaKnown RBP22.8■■□□□ 1.24
SCARB1-210ENST00000545493 TFAMQ00059 246 aaKnown RBP22.8■■□□□ 1.24
SCARB1-210ENST00000545493 SV2CQ496J9 727 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 WSCD1Q658N2 575 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 ARMCX5Q6P1M9 558 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 VITQ6UXI7 678 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 CXorf38Q8TB03 319 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 SMARCD2Q92925 531 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 SHDQ96IW2 340 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 PCIF1Q9H4Z3 704 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 TMEM206Q9H813 350 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 ZFP14Q9HCL3 533 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 LTB4R2Q9NPC1 389 aa22.8■■□□□ 1.24
SCARB1-210ENST00000545493 A0A1W2PRU2 124 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 SHISA7A6NL88 538 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 EXTL3O43909 919 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 LDHAP00338 332 aaKnown RBP22.79■■□□□ 1.24
SCARB1-210ENST00000545493 ITGB3P05106 788 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 ATF6P18850 670 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 CDR1P51861 262 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 EPHB3P54753 998 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 STXBP5Q5T5C0 1151 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 TPRG1Q6ZUI0 275 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 ZSCAN18Q8TBC5 510 aaPredicted RBP22.79■■□□□ 1.24
SCARB1-210ENST00000545493 DNASE1L2Q92874 299 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 PSMG2Q969U7 264 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 LPIN3Q9BQK8 851 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 HSFX1Q9UBD0 423 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 MTF2Q9Y483 593 aaPredicted RBP22.79■■□□□ 1.24
SCARB1-210ENST00000545493 PTPRJQ12913 1337 aa22.79■■□□□ 1.24
SCARB1-210ENST00000545493 KPNA7A9QM74 516 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 CD72P21854 359 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 HOXD13P35453 343 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 ALDH1A3P47895 512 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 ASIC1P78348 528 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 GPD1LQ8N335 351 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 NOC3LQ8WTT2 800 aaKnown RBP22.78■■□□□ 1.24
SCARB1-210ENST00000545493 RSPRY1Q96DX4 576 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 SEPT5Q99719 369 aaPredicted RBP22.78■■□□□ 1.24
SCARB1-210ENST00000545493 MKNK1Q9BUB5 465 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 MTMR12Q9C0I1 747 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 TRPV4Q9HBA0 871 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 HEBP1Q9NRV9 189 aa22.78■■□□□ 1.24
SCARB1-210ENST00000545493 OBSL1O75147 1896 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 TARSP26639 723 aaKnown RBP22.77■■□□□ 1.24
SCARB1-210ENST00000545493 PNPLA4P41247 253 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 VIPR2P41587 438 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 UBXN2BQ14CS0 331 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 LMBRD2Q68DH5 695 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-210ENST00000545493 CNNM4Q6P4Q7 775 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 GAREM2Q75VX8 874 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 EPM2AIP1Q7L775 607 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-210ENST00000545493 LRRTM3Q86VH5 581 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 METTL23Q86XA0 190 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 KCNG4Q8TDN1 519 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 LRRC27Q9C0I9 530 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 PDE11AQ9HCR9 933 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 SIX4Q9UIU6 781 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 L1RE1Q9UN81 338 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 AGAP1Q9UPQ3 857 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 ASB3Q9Y575 518 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 FANCMQ8IYD8 2048 aa22.77■■□□□ 1.24
SCARB1-210ENST00000545493 KIF26AQ9ULI4 1882 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-210ENST00000545493 FRYLO94915 3013 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 CASP1P29466 404 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 EHHADHQ08426 723 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 DNAJB7Q7Z6W7 309 aaPredicted RBP22.76■■□□□ 1.23
SCARB1-210ENST00000545493 PDCL2Q8N4E4 241 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 LRRC52Q8N7C0 313 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 IQUBQ8NA54 791 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 DEPDC1BQ8WUY9 529 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 SLITRK6Q9H5Y7 841 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 BRD9Q9H8M2 597 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 ITGA11Q9UKX5 1188 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 PCDHA7Q9UN72 937 aa22.76■■□□□ 1.23
SCARB1-210ENST00000545493 EIF3DO15371 548 aaKnown RBP eCLIP22.75■■□□□ 1.231e-7■□□□□ 8.6
SCARB1-210ENST00000545493 POLR2DO15514 142 aaKnown RBP22.75■■□□□ 1.23
SCARB1-210ENST00000545493 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
SCARB1-210ENST00000545493 PSMC3P17980 439 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 MGAT5BQ3V5L5 792 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 FAM26FQ5R3K3 315 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 STXBP4Q6ZWJ1 553 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 CBWD2Q8IUF1 395 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 C1orf210Q8IVY1 113 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 MAML2Q8IZL2 1156 aaPredicted RBP22.75■■□□□ 1.23
SCARB1-210ENST00000545493 THEM5Q8N1Q8 247 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 SPPL2BQ8TCT7 592 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 C2orf15Q8WU43 125 aaKnown RBP22.75■■□□□ 1.23
SCARB1-210ENST00000545493 NKD2Q969F2 451 aaPredicted RBP22.75■■□□□ 1.23
SCARB1-210ENST00000545493 C7orf25Q9BPX7 421 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 TRMT61BQ9BVS5 477 aaKnown RBP22.75■■□□□ 1.23
SCARB1-210ENST00000545493 OSBPL6Q9BZF3 934 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 MAGEF1Q9HAY2 307 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 TMLHEQ9NVH6 421 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 ABI2Q9NYB9 513 aaPredicted RBP22.75■■□□□ 1.23
SCARB1-210ENST00000545493 HSPBP1Q9NZL4 362 aa22.75■■□□□ 1.23
SCARB1-210ENST00000545493 HEPACAM2A8MVW5 462 aa22.74■■□□□ 1.23
SCARB1-210ENST00000545493 TULP1O00294 542 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms