RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 RASSF8Q8NHQ8 419 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 SLC22A17Q8WUG5 538 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 LARP4BQ92615 738 aaKnown RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 RAD54LQ92698 747 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 CCDC74AQ96AQ1 378 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 KLHL5Q96PQ7 755 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 PLIN2Q99541 437 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 ACO2Q99798 780 aaKnown RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 REEP2Q9BRK0 252 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 CCDC94Q9BW85 323 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 CDT1Q9H211 546 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 ADAM7Q9H2U9 754 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 ZSCAN16Q9H4T2 348 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 POLD4Q9HCU8 107 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 TOPORSQ9NS56 1045 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 CHST7Q9NS84 486 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 BLOC1S4Q9NUP1 217 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 LARSQ9P2J5 1176 aaKnown RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 VTI1BQ9UEU0 232 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 MTMR6Q9Y217 621 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 GDAQ9Y2T3 454 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 MIA3Q5JRA6 1907 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 OBSL1O75147 1896 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 CASTOR2A6NHX0 329 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 F8W810 466 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 TMEM189-UBE2V1I3L0A0 370 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 TEX28O15482 410 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 MMP20O60882 483 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 TOM1L1O75674 476 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 KIF4AO95239 1232 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 THBS1P07996 1170 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 MCF2P10911 925 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 EPCAMP16422 314 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 ADH6P28332 368 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 GNA15P30679 374 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 ABCD1P33897 745 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 MTHFRP42898 656 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 YARSP54577 528 aaKnown RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 NCKAP1LP55160 1127 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 RAD51AP2Q09MP3 1159 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 ELAVL2Q12926 359 aaKnown RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 NOLC1Q14978 699 aaKnown RBP eCLIP8.39□□□□□ -1.076e-9■■■■■ 29.1
SNHG1-223ENST00000545440 KARSQ15046 597 aaKnown RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 USP41Q3LFD5 358 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 ARSHQ5FYA8 562 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 XKR4Q5GH76 650 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 TMEM31Q5JXX7 168 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 ZNF468Q5VIY5 522 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 KIAA0319Q5VV43 1072 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 ELMSAN1Q6PJG2 1045 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 SYT9Q86SS6 491 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 GPBP1Q86WP2 473 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 HSCBQ8IWL3 235 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 CEP120Q8N960 986 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 LRRC15Q8TF66 581 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 IRF7Q92985 503 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 SNX27Q96L92 541 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 RIPOR3Q96MK2 946 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 UROC1Q96N76 676 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 PPP1R10Q96QC0 940 aaKnown RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 PAAF1Q9BRP4 392 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 TARS2Q9BW92 718 aaKnown RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 PARVGQ9HBI0 331 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 RXFP1Q9HBX9 757 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 STK17AQ9UEE5 414 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 DPP7Q9UHL4 492 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 FBXO2Q9UK22 296 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 NR2E1Q9Y466 385 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 SRPRBQ9Y5M8 271 aaKnown RBP8.39□□□□□ -1.07
SNHG1-223ENST00000545440 CLIC4Q9Y696 253 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 ZDBF2Q9HCK1 2354 aa8.39□□□□□ -1.07
SNHG1-223ENST00000545440 PRR33A8MZF0 331 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 K7ENM7 598 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 C2CD2LO14523 706 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 TBCAO75347 108 aaKnown RBP8.38□□□□□ -1.07
SNHG1-223ENST00000545440 PAPLNO95428 1278 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 GLUD1P00367 558 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 ALAS2P22557 587 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 KLRC2P26717 231 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 NASPP49321 788 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-223ENST00000545440 GLRA4Q5JXX5 417 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 RARS2Q5T160 578 aaKnown RBP8.38□□□□□ -1.07
SNHG1-223ENST00000545440 PDXDC1Q6P996 788 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 ALKAL1Q6UXT8 129 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 C15orf39Q6ZRI6 1047 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 HAUS6Q7Z4H7 955 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 CMASQ8NFW8 434 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-223ENST00000545440 HDAC7Q8WUI4 952 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 FBXL18Q96ME1 805 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 USP28Q96RU2 1077 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 SLC30A3Q99726 388 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 RHOBTB2Q9BYZ6 727 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 GPR62Q9BZJ7 368 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 CXCL16Q9H2A7 254 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 POMKQ9H5K3 350 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 MAN1C1Q9NR34 630 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 SLC38A7Q9NVC3 462 aa8.38□□□□□ -1.07
SNHG1-223ENST00000545440 CNTN3Q9P232 1028 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms