RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 CHRNB2P17787 502 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 WARSP23381 471 aaKnown RBP14.68□□□□□ -0.06
SCARB1-209ENST00000545305 BRD2P25440 801 aaKnown RBP14.68□□□□□ -0.06
SCARB1-209ENST00000545305 RAD23BP54727 409 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 FPGSQ05932 587 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 SOWAHAQ2M3V2 549 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 PPP1R2P3Q6NXS1 205 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.68□□□□□ -0.06
SCARB1-209ENST00000545305 METTL23Q86XA0 190 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 REXO1L1PQ8IX06 675 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 TMEM86AQ8N2M4 240 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 LRRC43Q8N309 656 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 DDX1Q92499 740 aaKnown RBP14.68□□□□□ -0.06
SCARB1-209ENST00000545305 SENP8Q96LD8 212 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 MRPL45Q9BRJ2 306 aaKnown RBP14.68□□□□□ -0.06
SCARB1-209ENST00000545305 ELOVL4Q9GZR5 314 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 LZTFL1Q9NQ48 299 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 KIAA1257Q9ULG3 409 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 L1RE1Q9UN81 338 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 CEP83Q9Y592 693 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 ALPK3Q96L96 1907 aa14.68□□□□□ -0.06
SCARB1-209ENST00000545305 A8MXQ7 604 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 KIF2AO00139 706 aaPredicted RBP14.67□□□□□ -0.06
SCARB1-209ENST00000545305 DDHD2O94830 711 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 CALCAP01258 141 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 H2AFZP0C0S5 128 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 ACRP10323 421 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 VDRP11473 427 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 GNL1P36915 607 aaPredicted RBP14.67□□□□□ -0.06
SCARB1-209ENST00000545305 OR1G1P47890 313 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 AARSP49588 968 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCARB1-209ENST00000545305 GATMP50440 423 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 PTPN14Q15678 1187 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 CLEC16AQ2KHT3 1053 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 ZNF662Q6ZS27 426 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 H2AFVQ71UI9 128 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 ZNF280BQ86YH2 543 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 COLGALT2Q8IYK4 626 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 PDCL2Q8N4E4 241 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 SLC4A11Q8NBS3 891 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 OLIG1Q8TAK6 271 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 WHAMMQ8TF30 809 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 RABGGTAQ92696 567 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 VWCEQ96DN2 955 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 HEXIM2Q96MH2 286 aaKnown RBP14.67□□□□□ -0.06
SCARB1-209ENST00000545305 PAAF1Q9BRP4 392 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 HMGXB4Q9UGU5 601 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 DSEQ9UL01 958 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 INTUQ9ULD6 942 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 NENFQ9UMX5 172 aa14.67□□□□□ -0.06
SCARB1-209ENST00000545305 TMCO5BA8MYB1 307 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 TMEM189-UBE2V1I3L0A0 370 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 KIF5CO60282 957 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 RTN2O75298 545 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 KIF4AO95239 1232 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 LSM8O95777 96 aaKnown RBP14.66□□□□□ -0.06
SCARB1-209ENST00000545305 GZMAP12544 262 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 WDR5P61964 334 aaKnown RBP14.66□□□□□ -0.06
SCARB1-209ENST00000545305 ORC1Q13415 861 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 STILQ15468 1287 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 PAN2Q504Q3 1202 aaKnown RBP14.66□□□□□ -0.06
SCARB1-209ENST00000545305 SGO2Q562F6 1265 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 LIMS2Q7Z4I7 341 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 CRIPAKQ8N1N5 446 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 C3orf58Q8NDZ4 430 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 SPATA18Q8TC71 538 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 HASPINQ8TF76 798 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 KBTBD7Q8WVZ9 684 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 ZNF606Q8WXB4 792 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 CTNNBL1Q8WYA6 563 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-209ENST00000545305 BADQ92934 168 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 TNIP3Q96KP6 325 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 C16orf45Q96MC5 204 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-209ENST00000545305 TWNKQ96RR1 684 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 PCDHB18PQ96TA0 734 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 TMEM175Q9BSA9 504 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 COLEC11Q9BWP8 271 aa14.66□□□□□ -0.06
SCARB1-209ENST00000545305 PRG3Q9Y2Y8 225 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-209ENST00000545305 ZBBXA8MT70 800 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 PJA2O43164 708 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 TRAPPC3O43617 180 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 FGBP02675 491 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 TUBB4AP04350 444 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 ARHGAP25P42331 645 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 NSFP46459 744 aaKnown RBP14.65□□□□□ -0.06
SCARB1-209ENST00000545305 LHX1P48742 406 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 TIGD5Q53EQ6 642 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 WSCD1Q658N2 575 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 PSRC1Q6PGN9 363 aaPredicted RBP14.65□□□□□ -0.06
SCARB1-209ENST00000545305 ACOT1Q86TX2 421 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 PALB2Q86YC2 1186 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 PASD1Q8IV76 773 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 TOP1MTQ969P6 601 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 TRIM11Q96F44 468 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 SUSD3Q96L08 255 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 NRDE2Q9H7Z3 1164 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 DNAJB4Q9UDY4 337 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 GUCA1BQ9UMX6 200 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 PCDHB8Q9UN66 801 aa14.65□□□□□ -0.06
SCARB1-209ENST00000545305 PCDHGC3Q9UN70 934 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms