RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FAM167AQ96KS9 214 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 VPS13AQ96RL7 3174 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 SCNM1Q9BWG6 230 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 VN1R3Q9BXE9 311 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 LRRC3Q9BY71 257 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 GCOM2Q9BZD3 368 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 INO80BQ9C086 356 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 ARRDC1-AS1Q9H2J1 176 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 LMAN1LQ9HAT1 526 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 UBN1Q9NPG3 1134 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 HEBP1Q9NRV9 189 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 VPS45Q9NRW7 570 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 KCNH7Q9NS40 1196 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 KRT82Q9NSB4 513 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 FAM105AQ9NUU6 356 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 GDE1Q9NZC3 331 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 UBP1Q9NZI7 540 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 ZSWIM5Q9P217 1185 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 FNIP2Q9P278 1114 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 DNAJB4Q9UDY4 337 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 SEC63Q9UGP8 760 aaKnown RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 CNTNAP2Q9UHC6 1331 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 TCEAL9Q9UHQ7 104 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 KCNH3Q9ULD8 1083 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 NDRG2Q9UN36 371 aaKnown RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 WASF3Q9UPY6 502 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 MSRB2Q9Y3D2 182 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 CHD8Q9HCK8 2581 aa4.59□□□□□ -1.68
SNHG1-220ENST00000544550 OTOGLQ3ZCN5 2332 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 LOXHD1Q8IVV2 1947 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 USP24Q9UPU5 2620 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 A0A0A0MRY4 1105 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CCDC163A0A0D9SF12 145 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 ERICH2A1L162 156 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CHURC1-FNTBB4DL54 471 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 H0Y626 953 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 NRP1O14786 923 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CYTH3O43739 400 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 ADAM11O75078 769 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CILPO75339 1184 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 AKAP3O75969 853 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 TRIM16O95361 564 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 MAOBP27338 520 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 DNAJA1P31689 397 aaKnown RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CD68P34810 354 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 MPLP40238 635 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 SOX9P48436 509 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 FNTBP49356 437 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CLCN3P51790 818 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 MLLT6P55198 1093 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 SNRPNP63162 240 aaKnown RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 SATB1Q01826 763 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 SEPT6Q14141 434 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 MPP2Q14168 576 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 USP41Q3LFD5 358 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 FOXD4L6Q3SYB3 417 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 PPM1LQ5SGD2 360 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 EFCAB12Q6NXP0 572 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 LILRA6Q6PI73 481 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 ABHD15Q6UXT9 468 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 FOXD4L3Q6VB84 417 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 WDR5BQ86VZ2 330 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 PROSER1Q86XN7 944 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 PALB2Q86YC2 1186 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 SMAP1Q8IYB5 467 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 RNF168Q8IYW5 571 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 FMR1NBQ8N0W7 255 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CNNM3Q8NE01 707 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 KCNB2Q92953 911 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 ELSPBP1Q96BH3 223 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 RRP36Q96EU6 259 aaKnown RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 MBOAT7Q96N66 472 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 KXD1Q9BQD3 176 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CORO1BQ9BR76 489 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 MXRA8Q9BRK3 442 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 LZTS2Q9BRK4 669 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 EDEM2Q9BV94 578 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 SLC32A1Q9H598 525 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CCDC86Q9H6F5 360 aaKnown RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 DCTPP1Q9H773 170 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 PSTPIP2Q9H939 334 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 RSAD1Q9HA92 442 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 LY9Q9HBG7 655 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 AGO4Q9HCK5 861 aaKnown RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 TRPV5Q9NQA5 729 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 CHST7Q9NS84 486 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 KCNK4Q9NYG8 393 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 NOP53Q9NZM5 478 aaKnown RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 PIN4Q9Y237 131 aaKnown RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 ATRXP46100 2492 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 EP300Q09472 2414 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-220ENST00000544550 PATJQ8NI35 1801 aa4.58□□□□□ -1.68
SNHG1-220ENST00000544550 A0A0D9SFI3 127 aa4.57□□□□□ -1.68
SNHG1-220ENST00000544550 LOC100289279A0A1B0GTE1 492 aa4.57□□□□□ -1.68
SNHG1-220ENST00000544550 K7ESF4 209 aa4.57□□□□□ -1.68
SNHG1-220ENST00000544550 GNB5O14775 395 aa4.57□□□□□ -1.68
SNHG1-220ENST00000544550 DDX3YO15523 660 aaKnown RBP4.57□□□□□ -1.68
SNHG1-220ENST00000544550 ZNF862O60290 1169 aa4.57□□□□□ -1.68
SNHG1-220ENST00000544550 RPP40O75818 363 aaKnown RBP4.57□□□□□ -1.68
SNHG1-220ENST00000544550 DDHD2O94830 711 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms