RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KCNT1Q5JUK3 1230 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 ACAD10Q6JQN1 1059 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 RDM1Q8NG50 284 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 DDX50Q9BQ39 737 aaKnown RBP13.4□□□□□ -0.26
CHD4-211ENST00000544484 TASP1Q9H6P5 420 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 TMX2Q9Y320 296 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 FAM200BP0CF97 657 aa13.4□□□□□ -0.27
CHD4-211ENST00000544484 PYGBP11216 843 aa13.4□□□□□ -0.27
CHD4-211ENST00000544484 RPAINQ86UA6 219 aa13.4□□□□□ -0.27
CHD4-211ENST00000544484 YAF2Q8IY57 180 aa13.4□□□□□ -0.27
CHD4-211ENST00000544484 ATG4AQ8WYN0 398 aa13.4□□□□□ -0.27
CHD4-211ENST00000544484 NRBF2Q96F24 287 aa13.4□□□□□ -0.27
CHD4-211ENST00000544484 TSSK1BQ9BXA7 367 aa13.4□□□□□ -0.27
CHD4-211ENST00000544484 AK9Q5TCS8 1911 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 OGTO15294 1046 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 AKT1P31749 480 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 SOX11P35716 441 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 ACADSBP45954 432 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 CPT1AP50416 773 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 SNRPFP62306 86 aaKnown RBP13.39□□□□□ -0.27
CHD4-211ENST00000544484 ACOT1Q86TX2 421 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 SLC16A10Q8TF71 515 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 CCDC90BQ9GZT6 254 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 LATS2Q9NRM7 1088 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 KBTBD4Q9NVX7 518 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 PAK5Q9P286 719 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 HPSEQ9Y251 543 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 PSMC6P62333 389 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 CHSY1Q86X52 802 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 CYP2W1Q8TAV3 490 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 CPB2Q96IY4 423 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 NDUFS3O75489 264 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 B3GAT3O94766 335 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 ACO1P21399 889 aaKnown RBP13.39□□□□□ -0.27
CHD4-211ENST00000544484 IFNA8P32881 189 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 STX3Q13277 289 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 C10orf120Q5SQS8 335 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 TTI2Q6NXR4 508 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 CCT8L2Q96SF2 557 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 COG4Q9H9E3 785 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 REREQ9P2R6 1566 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 PRPF4O43172 522 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■□□□ 12.1
CHD4-211ENST00000544484 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 SUPT20HL2P0C7V6 817 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 KRT4P19013 534 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 EPHB2P29323 1055 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 EARS2Q5JPH6 523 aaKnown RBP13.39□□□□□ -0.27
CHD4-211ENST00000544484 EFHC1Q5JVL4 640 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 GRAMD1AQ96CP6 724 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 C17orf75Q9HAS0 396 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 C17orf102A2RUQ5 167 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 DNAJC8O75937 253 aaPredicted RBP13.39□□□□□ -0.27
CHD4-211ENST00000544484 COILP38432 576 aaPredicted RBP13.39□□□□□ -0.27
CHD4-211ENST00000544484 SLC29A2Q14542 456 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 PPP4R4Q6NUP7 873 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 ZNF677Q86XU0 584 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 REXO1L1PQ8IX06 675 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 DCP1BQ8IZD4 617 aaKnown RBP13.39□□□□□ -0.27
CHD4-211ENST00000544484 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
CHD4-211ENST00000544484 SMG5Q9UPR3 1016 aaKnown RBP13.39□□□□□ -0.27
CHD4-211ENST00000544484 SLC30A1Q9Y6M5 507 aa13.39□□□□□ -0.27
CHD4-211ENST00000544484 CHUKO15111 745 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 RAD23BP54727 409 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 AP2B1P63010 937 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 PDK1Q15118 436 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 SH3TC2Q8TF17 1288 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 SYN2Q92777 582 aaPredicted RBP13.38□□□□□ -0.27
CHD4-211ENST00000544484 GLT1D1Q96MS3 346 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 IL17RBQ9NRM6 502 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 GTF3C4Q9UKN8 822 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 TCRBV5S4A2TA0A5A2 114 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 PGM1P36871 562 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 ZNF473Q8WTR7 871 aaKnown RBP13.38□□□□□ -0.27
CHD4-211ENST00000544484 ABTB1Q969K4 478 aaPredicted RBP13.38□□□□□ -0.27
CHD4-211ENST00000544484 ELMO3Q96BJ8 720 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 M0QYT0 321 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 ZNF197O14709 1029 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 HMOX2P30519 316 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 ATXN3P54252 364 aaPredicted RBP13.38□□□□□ -0.27
CHD4-211ENST00000544484 SPDYAQ5MJ70 313 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 RABGAP1LQ5R372 815 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 ELOA2Q8IYF1 753 aaPredicted RBP13.38□□□□□ -0.27
CHD4-211ENST00000544484 CYFIP2Q96F07 1278 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 ZCWPW1Q9H0M4 648 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 ARL2BPQ9Y2Y0 163 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 CAPN6Q9Y6Q1 641 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 MYO1DO94832 1006 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 RAP1GAPP47736 663 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 PTK2BQ14289 1009 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 KCTD17Q8N5Z5 321 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 GMCL1Q96IK5 515 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 EPN3Q9H201 632 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 NDE1Q9NXR1 346 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 AURKCQ9UQB9 309 aa13.38□□□□□ -0.27
CHD4-211ENST00000544484 TMEM120BA0PK00 339 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms