RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 SMARCAD1Q9H4L7 1026 aa15.91■□□□□ 0.14
CHFR-223ENST00000544268 A6NHS1 94 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 CLDN3O15551 220 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 ADCY6O43306 1168 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 SPOPO43791 374 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 RARAP10276 462 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 GLRA2P23416 452 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 SNX1Q13596 522 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 TRIM74Q86UV6 250 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 TRIM73Q86UV7 250 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 AGAP11Q8TF27 550 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 C1orf54Q8WWF1 131 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 ATG4AQ8WYN0 398 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 CHMP6Q96FZ7 201 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 HHIPL1Q96JK4 782 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 ZBTB45Q96K62 511 aaPredicted RBP15.9■□□□□ 0.14
CHFR-223ENST00000544268 SEMA4AQ9H3S1 761 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 RAB20Q9NX57 234 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 TLDC2A0PJX2 215 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 FOXO6A8MYZ6 492 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 MAFO75444 373 aaPredicted RBP15.9■□□□□ 0.14
CHFR-223ENST00000544268 GJB6O95452 261 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 CTGFP29279 349 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 ARL2P36404 184 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 SLCO1A2P46721 670 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 ACOT2P49753 483 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 CCL14Q16627 93 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 CCDC137Q6PK04 289 aaKnown RBP15.9■□□□□ 0.14
CHFR-223ENST00000544268 PPTC7Q8NI37 304 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 USP6NLQ92738 828 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 EMID1Q96A84 441 aaPredicted RBP15.9■□□□□ 0.14
CHFR-223ENST00000544268 CENPTQ96BT3 561 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 YIPF3Q9GZM5 350 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 HAPLN2Q9GZV7 340 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 DNAJC17Q9NVM6 304 aaKnown RBP15.9■□□□□ 0.14
CHFR-223ENST00000544268 ARHGAP28Q9P2N2 729 aa15.9■□□□□ 0.14
CHFR-223ENST00000544268 DIAPH2O60879 1101 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 LGALS2P05162 132 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 CYP2B6P20813 491 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 CCND1P24385 295 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 CYP24A1Q07973 514 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 ITIH4Q14624 930 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 SIX1Q15475 284 aaPredicted RBP15.89■□□□□ 0.13
CHFR-223ENST00000544268 TBC1D25Q3MII6 688 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 DUSP28Q4G0W2 176 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 C11orf63Q6NUN7 778 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 SLC30A9Q6PML9 568 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 PASD1Q8IV76 773 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 TRAPPC12Q8WVT3 735 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 BICD1Q96G01 975 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 RNPEPQ9H4A4 650 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 FAM114A2Q9NRY5 505 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHFR-223ENST00000544268 PCDHA3Q9Y5H8 950 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 CA12O43570 354 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 PHF2O75151 1096 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 PPFIA2O75334 1257 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 LUC7L3O95232 432 aaKnown RBP15.89■□□□□ 0.13
CHFR-223ENST00000544268 EDN1P05305 212 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 HOXC6P09630 235 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 LINGO3P0C6S8 592 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 NEFHP12036 1026 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 RFX1P22670 979 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 SLC26A2P50443 739 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 SLC29A2Q14542 456 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 TRIP13Q15645 432 aaPredicted RBP15.89■□□□□ 0.13
CHFR-223ENST00000544268 FBXL13Q8NEE6 735 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 PWWP2AQ96N64 755 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 CNOT10Q9H9A5 744 aaKnown RBP15.89■□□□□ 0.13
CHFR-223ENST00000544268 TMEM8AQ9HCN3 771 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 GJD2Q9UKL4 321 aa15.89■□□□□ 0.13
CHFR-223ENST00000544268 GOLGA6L10A0A0M3HER8 536 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 TNPO2O14787 897 aaKnown RBP15.88■□□□□ 0.13
CHFR-223ENST00000544268 P4HA2O15460 535 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 ZNF286BP0CG31 522 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 MFAP3P55082 362 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 NLRP11P59045 1033 aaKnown RBP15.88■□□□□ 0.13
CHFR-223ENST00000544268 IFI35P80217 286 aaPredicted RBP15.88■□□□□ 0.13
CHFR-223ENST00000544268 TBC1D1Q86TI0 1168 aaPredicted RBP15.88■□□□□ 0.13
CHFR-223ENST00000544268 PRUNE1Q86TP1 453 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 MFN1Q8IWA4 741 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 UBL4BQ8N7F7 174 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 ZNF784Q8NCA9 323 aaPredicted RBP15.88■□□□□ 0.13
CHFR-223ENST00000544268 ERAP1Q9NZ08 941 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 EXOC7Q9UPT5 735 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 LRRIQ4A6NIV6 560 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 ASAP2O43150 1006 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 CTNNA2P26232 953 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 PDE6CP51160 858 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 CDR2Q01850 454 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 ERMARDQ5T6L9 678 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 IQSEC1Q6DN90 963 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 CCDC25Q86WR0 208 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 LRRC71Q8N4P6 559 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 NT5C1BQ96P26 610 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 RAB17Q9H0T7 212 aa15.88■□□□□ 0.13
CHFR-223ENST00000544268 TTLL13PA6NNM8 815 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 AOC2O75106 756 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 RTN3O95197 1032 aaPredicted RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 CYP1A2P05177 515 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms