RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 STIM1Q13586 685 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 ANKRD40Q6AI12 368 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 INTS8Q75QN2 995 aaKnown RBP23.41■■□□□ 1.34
OTUB1-212ENST00000543988 TOP6BLQ8N6T0 577 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 ZCWPW1Q9H0M4 648 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 XYLT2Q9H1B5 865 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 WDR6Q9NNW5 1121 aaKnown RBP23.41■■□□□ 1.34
OTUB1-212ENST00000543988 INSL5Q9Y5Q6 135 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 C2CD4DB7Z1M9 353 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 PHACTR2O75167 634 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 XYLBO75191 536 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 TRIM49P0CI25 452 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 TRIM49CP0CI26 452 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 VAMP7P51809 220 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 MYL6P60660 151 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 LRRC63Q05C16 580 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 TRPC3Q13507 836 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 SOWAHAQ2M3V2 549 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 KLHL10Q6JEL2 608 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 RTL10Q7L3V2 364 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 LIMS2Q7Z4I7 341 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 OSTM1Q86WC4 334 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 ZC3H3Q8IXZ2 948 aaKnown RBP23.4■■□□□ 1.34
OTUB1-212ENST00000543988 ADGRF2Q8IZF7 708 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 THEM5Q8N1Q8 247 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 KHSRPQ92945 711 aaKnown RBP eCLIP23.4■■□□□ 1.34
OTUB1-212ENST00000543988 CRISPLD1Q9H336 500 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 KIAA1468Q9P260 1216 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 MAFFQ9ULX9 164 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 POLIQ9UNA4 740 aa23.4■■□□□ 1.34
OTUB1-212ENST00000543988 MTMR11A4FU01 709 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 PPP1R3GB7ZBB8 358 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 CETN3O15182 167 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 VNN1O95497 513 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 C4BPAP04003 597 aaKnown RBP23.39■■□□□ 1.33
OTUB1-212ENST00000543988 KRT13P13646 458 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 CCNE1P24864 410 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 CDR1P51861 262 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 NCOA4Q13772 614 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 SLC39A12Q504Y0 691 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 GRASPQ7Z6J2 395 aaPredicted RBP23.39■■□□□ 1.33
OTUB1-212ENST00000543988 TMEM86AQ8N2M4 240 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 TDRD5Q8NAT2 981 aaKnown RBP23.39■■□□□ 1.33
OTUB1-212ENST00000543988 DHTKD1Q96HY7 919 aaPredicted RBP23.39■■□□□ 1.33
OTUB1-212ENST00000543988 MKNK1Q9BUB5 465 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 NR2E1Q9Y466 385 aa23.39■■□□□ 1.33
OTUB1-212ENST00000543988 HCRTO43612 131 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 STAU1O95793 577 aaKnown RBP23.38■■□□□ 1.33
OTUB1-212ENST00000543988 EPB41P11171 864 aaKnown RBP23.38■■□□□ 1.33
OTUB1-212ENST00000543988 PPP1R2P41236 205 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 NTHL1P78549 312 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 ZACNQ401N2 412 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 SV2AQ7L0J3 742 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 RNF135Q8IUD6 432 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 TTC9BQ8N6N2 239 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 ATAD1Q8NBU5 361 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 KBTBD7Q8WVZ9 684 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 HCFC1R1Q9NWW0 138 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 DDX43Q9NXZ2 648 aaKnown RBP23.38■■□□□ 1.33
OTUB1-212ENST00000543988 CTNND2Q9UQB3 1225 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 USTQ9Y2C2 406 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 YIPF1Q9Y548 306 aa23.38■■□□□ 1.33
OTUB1-212ENST00000543988 IKBKBO14920 756 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 SLC16A3O15427 465 aaKnown RBP23.37■■□□□ 1.33
OTUB1-212ENST00000543988 N4BP1O75113 896 aaKnown RBP23.37■■□□□ 1.33
OTUB1-212ENST00000543988 LRG1P02750 347 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 ACAT1P24752 427 aaKnown RBP23.37■■□□□ 1.33
OTUB1-212ENST00000543988 ATICP31939 592 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 FKBP3Q00688 224 aaKnown RBP23.37■■□□□ 1.33
OTUB1-212ENST00000543988 ENPEPQ07075 957 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 PPP3CAQ08209 521 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 DUSP4Q13115 394 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 ZNF699Q32M78 642 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 LRRTM3Q86VH5 581 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 TRIML1Q8N9V2 468 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 SPATA18Q8TC71 538 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 NELFBQ8WX92 580 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 SYAP1Q96A49 352 aaPredicted RBP23.37■■□□□ 1.33
OTUB1-212ENST00000543988 ELMO3Q96BJ8 720 aa23.37■■□□□ 1.33
OTUB1-212ENST00000543988 DENND4AQ7Z401 1863 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 GABRDO14764 452 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 GCLMP48507 274 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 TNNC1P63316 161 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 TSPY1Q01534 308 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 TWF1Q12792 350 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 CCDC142Q17RM4 750 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 WDR72Q3MJ13 1102 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 TTI2Q6NXR4 508 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 DPH6Q7L8W6 267 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 OTOP3Q7RTS5 596 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 MMS19Q96T76 1030 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 DUSP9Q99956 384 aaKnown RBP23.36■■□□□ 1.33
OTUB1-212ENST00000543988 DNMT3BQ9UBC3 853 aaKnown RBP23.36■■□□□ 1.33
OTUB1-212ENST00000543988 NXF1Q9UBU9 619 aaKnown RBP23.36■■□□□ 1.33
OTUB1-212ENST00000543988 SLC27A5Q9Y2P5 690 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 C2orf16Q68DN1 1984 aa23.36■■□□□ 1.33
OTUB1-212ENST00000543988 WARSP23381 471 aaKnown RBP23.35■■□□□ 1.33
OTUB1-212ENST00000543988 PIK3CAP42336 1068 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 LHX1P48742 406 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 MCCD1P59942 119 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms