RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 HSP90AA4PQ58FG1 418 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 OSTM1Q86WC4 334 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 FBXL13Q8NEE6 735 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 ENOX1Q8TC92 643 aaKnown RBP16.19■□□□□ 0.18
CD9-210ENST00000543916 CASP10Q92851 521 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 MSLNLQ96KJ4 702 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 MMS19Q96T76 1030 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 MAN1C1Q9NR34 630 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 SAMSN1Q9NSI8 373 aaKnown RBP16.19■□□□□ 0.18
CD9-210ENST00000543916 THEGQ9P2T0 379 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 COG5Q9UP83 839 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 NFE2L3Q9Y4A8 694 aa16.19■□□□□ 0.18
CD9-210ENST00000543916 OR6C75A6NL08 312 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 C1RP00736 705 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 SRGAP2BP0DMP2 458 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 MYL7Q01449 175 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 KCNH2Q12809 1159 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 CLUL1Q15846 466 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 ZSCAN23Q3MJ62 389 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 ZNF667Q5HYK9 610 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 ANKRD54Q6NXT1 300 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 SYCE2Q6PIF2 218 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 SCARA5Q6ZMJ2 495 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 DPH6Q7L8W6 267 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 TMEM86AQ8N2M4 240 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 FEZF2Q8TBJ5 459 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 TAF4BQ92750 862 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 MRPL45Q9BRJ2 306 aaKnown RBP16.18■□□□□ 0.18
CD9-210ENST00000543916 OXCT2Q9BYC2 517 aaPredicted RBP16.18■□□□□ 0.18
CD9-210ENST00000543916 SMYD3Q9H7B4 428 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 APOBEC3GQ9HC16 384 aaKnown RBP16.18■□□□□ 0.18
CD9-210ENST00000543916 RAB20Q9NX57 234 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 FBXW11Q9UKB1 542 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 COQ4Q9Y3A0 265 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.18■□□□□ 0.18
CD9-210ENST00000543916 C2orf16Q68DN1 1984 aa16.18■□□□□ 0.18
CD9-210ENST00000543916 GABRDO14764 452 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 ABLIM3O94929 683 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 VNN2O95498 520 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 CPB1P15086 417 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 WARSP23381 471 aaKnown RBP16.17■□□□□ 0.18
CD9-210ENST00000543916 ACAT1P24752 427 aaKnown RBP16.17■□□□□ 0.18
CD9-210ENST00000543916 MTIF2P46199 727 aaKnown RBP16.17■□□□□ 0.18
CD9-210ENST00000543916 RAP1GAPP47736 663 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 NOP14P78316 857 aaKnown RBP16.17■□□□□ 0.18
CD9-210ENST00000543916 MYL5Q02045 173 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 RNF19BQ6ZMZ0 732 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 CREBRFQ8IUR6 639 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 FAM114A1Q8IWE2 563 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 THEM5Q8N1Q8 247 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 C12orf76Q8N812 135 aaPredicted RBP16.17■□□□□ 0.18
CD9-210ENST00000543916 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 ZNF461Q8TAF7 563 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 SPATA18Q8TC71 538 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 APOL5Q9BWW9 433 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 IMPG2Q9BZV3 1241 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 ZCWPW1Q9H0M4 648 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 SDCBP2Q9H190 292 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 DZANK1Q9NVP4 752 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 DDX43Q9NXZ2 648 aaKnown RBP16.17■□□□□ 0.18
CD9-210ENST00000543916 NME7Q9Y5B8 376 aa16.17■□□□□ 0.18
CD9-210ENST00000543916 SPTBN5Q9NRC6 3674 aaKnown RBP16.16■□□□□ 0.18
CD9-210ENST00000543916 KCNJ18B7U540 433 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 PMM2O15305 246 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 TACC1O75410 805 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 AFPP02771 609 aaKnown RBP16.16■□□□□ 0.18
CD9-210ENST00000543916 ASPAP45381 313 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 CDR1P51861 262 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 CDH8P55286 799 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 KCNJ12Q14500 433 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 NCAPHQ15003 741 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 CCDC142Q17RM4 750 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 CDKAL1Q5VV42 579 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.16■□□□□ 0.18
CD9-210ENST00000543916 HDAC7Q8WUI4 952 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 S1PR5Q9H228 398 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 PLEKHA4Q9H4M7 779 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 CD207Q9UJ71 328 aa16.16■□□□□ 0.18
CD9-210ENST00000543916 N4BP1O75113 896 aaKnown RBP16.15■□□□□ 0.18
CD9-210ENST00000543916 RFPL2O75678 378 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 SEC24AO95486 1093 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 ATF2P15336 505 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 HOXB8P17481 243 aaPredicted RBP16.15■□□□□ 0.18
CD9-210ENST00000543916 LMO2P25791 158 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 LHX1P48742 406 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 GPR17Q13304 367 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 LEXMQ3ZCV2 418 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 SLC39A12Q504Y0 691 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 TCP11X2Q5H9J9 407 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 RARS2Q5T160 578 aaKnown RBP16.15■□□□□ 0.18
CD9-210ENST00000543916 TPGS2Q68CL5 300 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 DENND4AQ7Z401 1863 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 LRRTM3Q86VH5 581 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 SMRP1Q8NCR6 262 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 SLC7A14Q8TBB6 771 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 PGLYRP2Q96PD5 576 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 PKMYT1Q99640 499 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 BPIFA3Q9BQP9 254 aa16.15■□□□□ 0.18
CD9-210ENST00000543916 ACBD6Q9BR61 282 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms