RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 A0A1B0GUL6 1792 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 PI4K2BG5E9Z4 385 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 CRABP2P29373 138 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 AQP4P55087 323 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 PLCB3Q01970 1234 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 CETN1Q12798 172 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 GRAMD1BQ3KR37 738 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 TBC1D10BQ4KMP7 808 aaPredicted RBP13.33□□□□□ -0.28
SMG8-202ENST00000543872 TMPRSS6Q8IU80 811 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 FAM178BQ8IXR5 827 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 ZNF398Q8TD17 642 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 EPS8L1Q8TE68 723 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 TDRKHQ9Y2W6 561 aaKnown RBP13.33□□□□□ -0.28
SMG8-202ENST00000543872 ROBO3Q96MS0 1386 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 PIK3CDO00329 1044 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 NAT1P18440 290 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 BFSP1Q12934 665 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 NCOA4Q13772 614 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 SPDYAQ5MJ70 313 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 ACAD11Q709F0 780 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 ZCCHC9Q8N567 271 aaKnown RBP13.33□□□□□ -0.28
SMG8-202ENST00000543872 SKA1Q96BD8 255 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 RILPQ96NA2 401 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 FAM111AQ96PZ2 611 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 TMEM117Q9H0C3 514 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 KCNK13Q9HB14 408 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 AGPAT3Q9NRZ7 376 aa13.33□□□□□ -0.28
SMG8-202ENST00000543872 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 SPECC1L-ADORA2AF8WAN1 911 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 VCLP18206 1134 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 ARSEP51690 589 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 ALDH18A1P54886 795 aaKnown RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 DUS1LQ6P1R4 473 aaKnown RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 KRT10P13645 584 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 RPA1P27694 616 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 SERPINB6P35237 376 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 SNAP25P60880 206 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 PPP3CAQ08209 521 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 TFDP1Q14186 410 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 PDK3Q15120 406 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 TRIP10Q15642 601 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 ZYXQ15942 572 aaKnown RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 TRMT5Q32P41 509 aaKnown RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 PARP10Q53GL7 1025 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 RINT1Q6NUQ1 792 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 DGCR14Q96DF8 476 aaKnown RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 ANO3Q9BYT9 981 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 GTF3C4Q9UKN8 822 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 MAP3K10Q02779 954 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 ODR4Q5SWX8 454 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 NCCRP1Q6ZVX7 275 aaPredicted RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 PRPF39Q86UA1 669 aaKnown RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 FAM81BQ96LP2 452 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 CATSPER2Q96P56 530 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 BARX2Q9UMQ3 279 aaPredicted RBP13.32□□□□□ -0.28
SMG8-202ENST00000543872 WDR37Q9Y2I8 494 aa13.32□□□□□ -0.28
SMG8-202ENST00000543872 C1orf167Q5SNV9 1468 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 LPXNO60711 386 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 ABHD2P08910 425 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 CCDC166P0CW27 439 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 ATF7P17544 494 aaPredicted RBP13.31□□□□□ -0.28
SMG8-202ENST00000543872 RAP1GDS1P52306 607 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 SH3BGRP55822 239 aaPredicted RBP13.31□□□□□ -0.28
SMG8-202ENST00000543872 ACTR3P61158 418 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 FMO1Q01740 532 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 BMT2Q1RMZ1 405 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 CC2D2BQ6DHV5 1058 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 NET1Q7Z628 596 aaPredicted RBP13.31□□□□□ -0.28
SMG8-202ENST00000543872 SLF2Q8IX21 1173 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 SMYD1Q8NB12 490 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 GCNAQ96QF7 691 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 SHCBP1LQ9BZQ2 653 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 ZNF395Q9H8N7 513 aaPredicted RBP13.31□□□□□ -0.28
SMG8-202ENST00000543872 TMEM98Q9Y2Y6 226 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 CCDC195A0A1B0GUA6 201 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 CYP1A2P05177 515 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 KRT5P13647 590 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 PEX2P28328 305 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 KLC3Q6P597 504 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 SLFN12Q8IYM2 578 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 ETNPPLQ8TBG4 499 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 KCNN1Q92952 543 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 CCDC28BQ9BUN5 200 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 GRIP2Q9C0E4 1043 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 ARHGEF4Q9NR80 690 aa13.31□□□□□ -0.28
SMG8-202ENST00000543872 E5RJQ4 531 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 F8W8V4 182 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 hCG_1984214I3L0E3 225 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 PLSCR1O15162 318 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 MT-ND3P03897 115 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 DLDP09622 509 aaKnown RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 UQCRBP14927 111 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 SSTR3P32745 418 aaPredicted RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 CA8P35219 290 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms