RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 LARP4Q71RC2 724 aaKnown RBP eCLIP4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 ZFPM1Q8IX07 1006 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 BCL6BQ8N143 479 aaPredicted RBP4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 PQLC1Q8N2U9 271 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 ESX1Q8N693 406 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 ATG16L2Q8NAA4 619 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 PCYOX1LQ8NBM8 494 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 PIK3C3Q8NEB9 887 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 PPP1R14CQ8TAE6 165 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 Q8TCH9 128 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 BRIX1Q8TDN6 353 aaKnown RBP4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 ZNF480Q8WV37 535 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 UCMAQ8WVF2 138 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 GCDHQ92947 438 aaPredicted RBP4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 NKD2Q969F2 451 aaPredicted RBP4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 IQCDQ96DY2 449 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 LMF1Q96S06 567 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 VRK1Q99986 396 aaPredicted RBP4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 KIAA1683Q9H0B3 1180 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 CCDC68Q9H2F9 335 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 SLITRK6Q9H5Y7 841 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 LDAHQ9H6V9 325 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 SEPSECSQ9HD40 501 aaKnown RBP4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 UBN1Q9NPG3 1134 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 LMBRD1Q9NUN5 540 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 BLOC1S4Q9NUP1 217 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 PCDHA3Q9Y5H8 950 aa4.48□□□□□ -1.69
GTF2H3-213ENST00000543415 A0A088AWK7 358 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 NCK2O43639 380 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 SGTAO43765 313 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 SOAT2O75908 522 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 ALDH1A2O94788 518 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 ALOX15P16050 662 aaPredicted RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CAPN3P20807 821 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 EEF1GP26641 437 aaKnown RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CTNNA1P35221 906 aaKnown RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 ATXN1P54253 815 aaKnown RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 PMS2P11Q13670 270 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 EIF4HQ15056 248 aaKnown RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 TAF11Q15544 211 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CNGA2Q16280 664 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CDC37Q16543 378 aaPredicted RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 TBR1Q16650 682 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 RNF151Q2KHN1 245 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 MST1LQ2TV78 715 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 TUBB8Q3ZCM7 444 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 ZNF568Q3ZCX4 644 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CCDC92Q53HC0 331 aaPredicted RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 SPDYAQ5MJ70 313 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 AGAP9Q5VTM2 703 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 Q6ZVL8 140 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 TAS1R1Q7RTX1 841 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 HEATR3Q7Z4Q2 680 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 COL23A1Q86Y22 540 aaPredicted RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CREBRFQ8IUR6 639 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CNPY4Q8N129 248 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 FBXO18Q8NFZ0 1043 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 SLC35A4Q96G79 324 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 NT5C1BQ96P26 610 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 GNRHR2Q96P88 292 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 PDCD2LQ9BRP1 358 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CNPPD1Q9BV87 410 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CARD11Q9BXL7 1154 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 SAYSD1Q9NPB0 183 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 LANCL2Q9NS86 450 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 TM7SF3Q9NS93 570 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 PIH1D1Q9NWS0 290 aaKnown RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 ABCF2Q9UG63 623 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 CPA4Q9UI42 421 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 VWA7Q9Y334 891 aa4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 RBM8AQ9Y5S9 174 aaKnown RBP4.47□□□□□ -1.69
GTF2H3-213ENST00000543415 MYBBP1AQ9BQG0 1328 aaKnown RBP4.46□□□□□ -1.69
GTF2H3-213ENST00000543415 FSD2A1L4K1 749 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 A6NCN8 305 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 MATN2O00339 956 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 TIPRLO75663 272 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 PTPN7P35236 360 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 SLC6A9P48067 706 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 HSPA7P48741 367 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 MRE11P49959 708 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 HK3P52790 923 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 DUSP2Q05923 314 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 FOXO1Q12778 655 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 TARDBPQ13148 414 aaKnown RBP eCLIP4.46□□□□□ -1.71e-6■■■■■ 26.8
GTF2H3-213ENST00000543415 PLS1Q14651 629 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 RAB39AQ14964 217 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 PCOLCEQ15113 449 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 PRKD1Q15139 912 aaPredicted RBP4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 PLCB4Q15147 1175 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 ATP2B3Q16720 1220 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 PFKFB4Q16877 469 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 C19orf54Q5BKX5 351 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 FBXO47Q5MNV8 452 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 CCDC30Q5VVM6 783 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 SWSAP1Q6NVH7 229 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 HIBCHQ6NVY1 386 aaPredicted RBP4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 PDXDC1Q6P996 788 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 GATAD2AQ86YP4 633 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 C2CD5Q86YS7 1000 aa4.46□□□□□ -1.7
GTF2H3-213ENST00000543415 CACNA2D3Q8IZS8 1091 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms