RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SUN2Q9UH99 717 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 LIMA1Q9UHB6 759 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 RSPH10B2B2RC85 870 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CYB561D2O14569 222 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ZNF197O14709 1029 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ATP9BO43861 1147 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 TMCC1O94876 653 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CTDNEP1O95476 244 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 RSPH10BP0C881 870 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 AKT1P31749 480 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 PEX19P40855 299 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ADCYAP1R1P41586 468 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 PSEN2P49810 448 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 POU5F1BQ06416 359 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 Q4G0T1 1027 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 LLGL2Q6P1M3 1020 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ANGPTL8Q6UXH0 198 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 SZRD1Q7Z422 152 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 KDELC2Q7Z4H8 507 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ZFPM1Q8IX07 1006 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 FBXO32Q969P5 355 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ZBTB18Q99592 522 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 SYNPO2Q9UMS6 1093 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 TCRBV5S4A2TA0A5A2 114 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 TTLL13PA6NNM8 815 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CASQ2O14958 399 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 HSPA4LO95757 839 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 VDRP11473 427 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 PTGISQ16647 500 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 KLHL38Q2WGJ6 581 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 GLE1Q53GS7 698 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 TRAPPC11Q7Z392 1133 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 PPM1NQ8N819 430 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CLMNQ96JQ2 1002 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 MRPL9Q9BYD2 267 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 FAM198AQ9UFP1 575 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 STK38LQ9Y2H1 464 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 GAKO14976 1311 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC15A5A6NIM6 579 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 AP3B1O00203 1094 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 KRT14P02533 472 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 MBL2P11226 248 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 GARTP22102 1010 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 EPHB3P54753 998 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 AMPD2Q01433 879 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ADCY2Q08462 1091 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 SFSWAPQ12872 951 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ATG16L1Q676U5 607 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 RIOX2Q8IUF8 465 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 PARP9Q8IXQ6 854 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 TMCO5AQ8N6Q1 288 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ATP6V0D2Q8N8Y2 350 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 BCAS4Q8TDM0 211 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 HASPINQ8TF76 798 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 BHMTQ93088 406 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CENPKQ9BS16 269 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 HTATIP2Q9BUP3 242 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 MTMR12Q9C0I1 747 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC30A1Q9Y6M5 507 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 NEURL4Q96JN8 1562 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 REREQ9P2R6 1566 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 WDR91A4D1P6 747 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 KPNA7A9QM74 516 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ARL4DP49703 201 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 LAMTOR4Q0VGL1 99 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC18A3Q16572 532 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CATSPERGQ6ZRH7 1159 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 ZNF677Q86XU0 584 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 MIB1Q86YT6 1006 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 DHX40Q8IX18 779 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CPB2Q96IY4 423 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 AGAP3Q96P47 875 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 VCX3AQ9NNX9 186 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 NFU1Q9UMS0 254 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 FHOD1Q9Y613 1164 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 H0Y626 953 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CAPN15O75808 1086 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC9A1P19634 815 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 IMPG1Q17R60 797 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 C6orf118Q5T5N4 469 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 DDIT4Q9NX09 232 aa7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 POLR1AO95602 1720 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-206ENST00000543397 CAMTA1Q9Y6Y1 1673 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 TRIM64CA6NLI5 447 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 KCNN4O15554 427 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 APOA4P06727 396 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 APLP1P51693 650 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 GRB10Q13322 594 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ARID5BQ14865 1188 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 P3H1Q32P28 736 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 PHLDB3Q6NSJ2 640 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 EMBQ6PCB8 327 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 MOB2Q70IA6 237 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 RCOR2Q8IZ40 523 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ADGRF2Q8IZF7 708 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 RPRD1AQ96P16 312 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 RRAGDQ9NQL2 400 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 IL17RBQ9NRM6 502 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 KLHL11Q9NVR0 708 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ZNF212Q9UDV6 495 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms