RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PVALEFA0A1B0GWK0 134 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZNF197O14709 1029 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 KIAA0391O15091 583 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ECI2O75521 394 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ITGB3P05106 788 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SLFN14P0C7P3 912 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CMA1P23946 247 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 AFMP43652 599 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 FAM78AQ5JUQ0 283 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PHLDB3Q6NSJ2 640 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ARMCX5Q6P1M9 558 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 STXBP4Q6ZWJ1 553 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 LIMS2Q7Z4I7 341 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 FLCNQ8NFG4 579 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 OR5B17Q8NGF7 314 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PAGE5Q96GU1 130 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PYM1Q9BRP8 204 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DDX23Q9BUQ8 820 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 GZF1Q9H116 711 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 MFSD1Q9H3U5 465 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ARHGEF3Q9NR81 526 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 AGPAT3Q9NRZ7 376 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 INTS13Q9NVM9 706 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 FAM13BQ9NYF5 915 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 HSPBP1Q9NZL4 362 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SERTAD1Q9UHV2 236 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 AGAP1Q9UPQ3 857 aa14.14□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CACNA1IQ9P0X4 2223 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 A0A1B0GVL5 298 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZNF233A6NK53 670 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SOAT2O75908 522 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 GJA1P17302 382 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PNPLA4P41247 253 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 STARD6P59095 220 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SV2CQ496J9 727 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SLC39A12Q504Y0 691 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CYP4A22Q5TCH4 519 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 IQCEQ6IPM2 695 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PDZD4Q76G19 769 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ALYREFQ86V81 257 aaKnown RBP14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PDCL2Q8N4E4 241 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CSGALNACT2Q8N6G5 542 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 LRRC52Q8N7C0 313 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 LEMD2Q8NC56 503 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SHKBP1Q8TBC3 707 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CACTINQ8WUQ7 758 aaKnown RBP14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ELSPBP1Q96BH3 223 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ASB16Q96NS5 453 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 MTMR12Q9C0I1 747 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TBC1D17Q9HA65 648 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TRPV4Q9HBA0 871 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SLC39A2Q9NP94 309 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TMLHEQ9NVH6 421 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 GDAP2Q9NXN4 497 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DLGAP2Q9P1A6 1054 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ITGA11Q9UKX5 1188 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 L1RE1Q9UN81 338 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 UBE4BO95155 1302 aa14.13□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SHISA7A6NL88 538 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 H0Y858 1186 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PFKFB1P16118 471 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CDR1P51861 262 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SNRPFP62306 86 aaKnown RBP14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 RBP5P82980 135 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 STK4Q13043 487 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PLD1Q13393 1074 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TEAD2Q15562 447 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 LMBRD2Q68DH5 695 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 GAREM2Q75VX8 874 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DNAJB7Q7Z6W7 309 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 OSTM1Q86WC4 334 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 METTL23Q86XA0 190 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CCDC105Q8IYK2 499 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ELMOD1Q8N336 334 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PSMG2Q969U7 264 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZNF560Q96MR9 790 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PKMYT1Q99640 499 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 MKNK1Q9BUB5 465 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZNF334Q9HCZ1 680 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ASAH2Q9NR71 780 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ASB3Q9Y575 518 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 NCANO14594 1321 aa14.12□□□□□ -0.15
TNFRSF1A-215ENST00000543359 GVINP1Q7Z2Y8 2422 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SPTBN4Q9H254 2564 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CLIC2O15247 247 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 MYL4P12829 197 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 GLULP15104 373 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ATF6P18850 670 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ALDH1A3P47895 512 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 MRE11P49959 708 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 EPHB3P54753 998 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 KRT85P78386 507 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SNW1Q13573 536 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SNRNP35Q16560 246 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SLC44A4Q53GD3 710 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 NELFCDQ8IXH7 590 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 THEM5Q8N1Q8 247 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DTWD2Q8NBA8 298 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 KIAA0895Q8NCT3 520 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms