RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 MID2Q9UJV3 735 aa14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 ASAP2O43150 1006 aa14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 SRGAP2BP0DMP2 458 aa14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 SMARCA1P28370 1054 aa14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 PAPOLAP51003 745 aaKnown RBP14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 RPS6P62753 249 aaKnown RBP14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 LRRC55Q6ZSA7 311 aa14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 CCDC117Q8IWD4 279 aaPredicted RBP14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 UBXN6Q9BZV1 441 aa14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 CAAP1Q9H8G2 361 aa14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 LRRC4BQ9NT99 713 aa14.49□□□□□ -0.09
RPS6KC1-206ENST00000543354 GOLGA8QA0A0J9YX86 632 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 GOLGA8OA6NCC3 632 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 GOLGA8NF8WBI6 632 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 E2F6O75461 281 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 NPR1P16066 1061 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 PREPLQ4J6C6 727 aaPredicted RBP14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 TEX9Q8N6V9 391 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 NKX2-3Q8TAU0 364 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 ACER1Q8TDN7 264 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 ZNF302Q9NR11 478 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 FAM49BQ9NUQ9 324 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 ANGPTL3Q9Y5C1 460 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 RIMS1Q86UR5 1692 aaKnown RBP14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 GSTA4O15217 222 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 POLD1P28340 1107 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 AQP5P55064 265 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 THEMIS2Q5TEJ8 643 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 CATSPER4Q7RTX7 472 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 ZNF720Q7Z2F6 126 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 RNF148Q8N7C7 305 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 RPS6KC1Q96S38 1066 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 PAFAH2Q99487 392 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 V9GYQ6 96 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 LCP1P13796 627 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 CACNA2D1P54289 1103 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 EFTUD2Q15029 972 aaKnown RBP eCLIP14.48□□□□□ -0.094e-6■■□□□ 13.9
RPS6KC1-206ENST00000543354 ERMARDQ5T6L9 678 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 ACTL9Q8TC94 416 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 CNBD2Q96M20 576 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 POLR3CQ9BUI4 534 aaPredicted RBP14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 IL1RL2Q9HB29 575 aa14.48□□□□□ -0.09
RPS6KC1-206ENST00000543354 M0QZ92 97 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 WDR46O15213 610 aaKnown RBP14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 EIF3DO15371 548 aaKnown RBP eCLIP14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 HNRNPCL1O60812 293 aaKnown RBP14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 SFNP31947 248 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 SURF1Q15526 300 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 PRR5LQ6MZQ0 368 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 SV2AQ7L0J3 742 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 BZW1Q7L1Q6 419 aaKnown RBP14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 FAM84AQ96KN4 292 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 MYLK2Q9H1R3 596 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 KDM6AO15550 1401 aaPredicted RBP14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 TNS3Q68CZ2 1445 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 PYGBP11216 843 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 GYS1P13807 737 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 ADRA1DP25100 572 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 OTUD4Q01804 1114 aaKnown RBP14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 RASA2Q15283 850 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 STXBP2Q15833 593 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 ANO4Q32M45 955 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 ARHGEF19Q8IW93 802 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 NUP93Q8N1F7 819 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 TCP10LQ8TDR4 215 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 NRBF2Q96F24 287 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 NEURL4Q96JN8 1562 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 DNAJC18Q9H819 358 aa14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 PIH1D1Q9NWS0 290 aaKnown RBP14.47□□□□□ -0.09
RPS6KC1-206ENST00000543354 EME2A4GXA9 379 aaPredicted RBP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 AKAP10O43572 662 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 AP1G2O75843 785 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 GHRP10912 638 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 PECAM1P16284 738 aaPredicted RBP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 NUMBP49757 651 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 KLC3Q6P597 504 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 PGM2Q96G03 612 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 DDX50Q9BQ39 737 aaKnown RBP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 TMEM120AQ9BXJ8 343 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 IPO11Q9UI26 975 aaKnown RBP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 FEM1BQ9UK73 627 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 AGAP1Q9UPQ3 857 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 IFT172Q9UG01 1749 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 A8MXQ7 604 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 APOL1O14791 398 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 ACADSP16219 412 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 DRD4P21917 467 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 NSUN2Q08J23 767 aaKnown RBP eCLIP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 AUHQ13825 339 aaKnown RBP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 KRT27Q7Z3Y8 459 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 USP33Q8TEY7 942 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 JPH1Q9HDC5 661 aaPredicted RBP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 SAE1Q9UBE0 346 aaPredicted RBP14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 SUN2Q9UH99 717 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 SUGT1Q9Y2Z0 365 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 SNX9Q9Y5X1 595 aa14.46□□□□□ -0.09
RPS6KC1-206ENST00000543354 MEGF6O75095 1541 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms