RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 UNC93AQ86WB7 457 aa17.13■□□□□ 0.33
TRIM65-204ENST00000543309 FIBCD1Q8N539 461 aa17.13■□□□□ 0.33
TRIM65-204ENST00000543309 CLP1Q92989 425 aaKnown RBP17.13■□□□□ 0.33
TRIM65-204ENST00000543309 ZNF558Q96NG5 402 aa17.13■□□□□ 0.33
TRIM65-204ENST00000543309 DNAI2Q9GZS0 605 aa17.13■□□□□ 0.33
TRIM65-204ENST00000543309 MARCH5Q9NX47 278 aa17.13■□□□□ 0.33
TRIM65-204ENST00000543309 HCSTQ9UBK5 93 aa17.13■□□□□ 0.33
TRIM65-204ENST00000543309 STK39Q9UEW8 545 aa17.13■□□□□ 0.33
TRIM65-204ENST00000543309 BARX2Q9UMQ3 279 aaPredicted RBP17.13■□□□□ 0.33
TRIM65-204ENST00000543309 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
TRIM65-204ENST00000543309 PRG3Q9Y2Y8 225 aaPredicted RBP17.13■□□□□ 0.33
TRIM65-204ENST00000543309 BZW2Q9Y6E2 419 aaKnown RBP17.13■□□□□ 0.33
TRIM65-204ENST00000543309 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■■ 118
TRIM65-204ENST00000543309 SYN3O14994 580 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 TLL1O43897 1013 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 TADA2AO75478 443 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 ITGB1P05556 798 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 DNAJB2P25686 324 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 PPM1AP35813 382 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 BPIFB4P59827 614 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 LRRC8AQ8IWT6 810 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 ADGRF2Q8IZF7 708 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 PDCL2Q8N4E4 241 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 COLGALT1Q8NBJ5 622 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 KBTBD7Q8WVZ9 684 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 RABGGTAQ92696 567 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 SDCBP2Q9H190 292 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 PCDHB8Q9UN66 801 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 RWDD3Q9Y3V2 267 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 PCDHB4Q9Y5E5 795 aa17.12■□□□□ 0.33
TRIM65-204ENST00000543309 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 GABRDO14764 452 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 GFPT2O94808 682 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 EFEMP2O95967 443 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 SERPING1P05155 500 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 PAEPP09466 180 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 IGFBP6P24592 240 aaPredicted RBP17.11■□□□□ 0.33
TRIM65-204ENST00000543309 BRCC3P46736 316 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 RAP1GAPP47736 663 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 LHX1P48742 406 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 CDH8P55286 799 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 GOLGA8FQ08AF8 430 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 GOLGA8DPQ0D2H9 430 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 ASIC2Q16515 512 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 SPOUT1Q5T280 376 aaKnown RBP17.11■□□□□ 0.33
TRIM65-204ENST00000543309 E4F1Q66K89 784 aaPredicted RBP17.11■□□□□ 0.33
TRIM65-204ENST00000543309 WDR59Q6PJI9 974 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 TMEM270Q6UE05 265 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 IRF2BP2Q7Z5L9 587 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 SLC39A11Q8N1S5 342 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 RBBP8NLQ8NC74 664 aaPredicted RBP17.11■□□□□ 0.33
TRIM65-204ENST00000543309 HASPINQ8TF76 798 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 IGSF21Q96ID5 467 aa17.11■□□□□ 0.33
TRIM65-204ENST00000543309 F8W810 466 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 NRDCO43847 1150 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 KRT5P13647 590 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 CD58P19256 250 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 ANXA13P27216 316 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 CLCN1P35523 988 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 USP8P40818 1118 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 PTK2Q05397 1052 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 WSCD1Q658N2 575 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 FUT10Q6P4F1 479 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 CYP26C1Q6V0L0 522 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 METTL23Q86XA0 190 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
TRIM65-204ENST00000543309 WHAMMQ8TF30 809 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 MRPL45Q9BRJ2 306 aaKnown RBP17.1■□□□□ 0.33
TRIM65-204ENST00000543309 NT5C1AQ9BXI3 368 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 SNX25Q9H3E2 840 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 SPG21Q9NZD8 308 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 KIAA1257Q9ULG3 409 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 PCDHB12Q9Y5F1 795 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
TRIM65-204ENST00000543309 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.09■□□□□ 0.33
TRIM65-204ENST00000543309 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.09■□□□□ 0.33
TRIM65-204ENST00000543309 SSU72P8A0A1W2PR75 194 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 CYP26A1O43174 497 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 PNMA6AP0CW24 399 aaPredicted RBP17.09■□□□□ 0.33
TRIM65-204ENST00000543309 FGFR3P22607 806 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 GNL1P36915 607 aaPredicted RBP17.09■□□□□ 0.33
TRIM65-204ENST00000543309 NDST1P52848 882 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 RAD23BP54727 409 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 KLHL30Q0D2K2 578 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
TRIM65-204ENST00000543309 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 TMTC1Q8IUR5 882 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 TMEM139Q8IV31 216 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 CRYBG2Q8N1P7 616 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 OR6B3Q8NGW1 331 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 TMEM176AQ96HP8 235 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 BAG1Q99933 345 aaPredicted RBP17.09■□□□□ 0.33
TRIM65-204ENST00000543309 PLVAPQ9BX97 442 aa17.09■□□□□ 0.33
TRIM65-204ENST00000543309 OXCT2Q9BYC2 517 aaPredicted RBP17.09■□□□□ 0.33
TRIM65-204ENST00000543309 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.33
TRIM65-204ENST00000543309 NT5C1B-RDH14C9J2C7 533 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms