RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 KLF1Q13351 362 aaPredicted RBP15.04■□□□□ -0
LDB3-207ENST00000542786 TMEM132DQ14C87 1099 aa15.04■□□□□ -0
LDB3-207ENST00000542786 CCL14Q16627 93 aa15.04■□□□□ -0
LDB3-207ENST00000542786 KIZQ2M2Z5 673 aa15.04■□□□□ -0
LDB3-207ENST00000542786 CFAP58Q5T655 872 aa15.04■□□□□ -0
LDB3-207ENST00000542786 RUFY4Q6ZNE9 571 aa15.04■□□□□ -0
LDB3-207ENST00000542786 TMC3Q7Z5M5 1100 aa15.04■□□□□ -0
LDB3-207ENST00000542786 ANKS1BQ7Z6G8 1248 aa15.04■□□□□ -0
LDB3-207ENST00000542786 CXCL16Q9H2A7 254 aa15.04■□□□□ -0
LDB3-207ENST00000542786 CYP3A43Q9HB55 503 aa15.04■□□□□ -0
LDB3-207ENST00000542786 GJD2Q9UKL4 321 aa15.04■□□□□ -0
LDB3-207ENST00000542786 NRCAMQ92823 1304 aa15.04■□□□□ -0
LDB3-207ENST00000542786 SMIM35A0A1B0GVV1 85 aa15.03■□□□□ -0
LDB3-207ENST00000542786 MANSC4A6NHS7 340 aaPredicted RBP15.03■□□□□ -0
LDB3-207ENST00000542786 TLR3O15455 904 aaKnown RBP15.03■□□□□ -0
LDB3-207ENST00000542786 POLR2BP30876 1174 aaKnown RBP15.03■□□□□ -0
LDB3-207ENST00000542786 HSD17B3P37058 310 aa15.03■□□□□ -0
LDB3-207ENST00000542786 WDR72Q3MJ13 1102 aa15.03■□□□□ -0
LDB3-207ENST00000542786 PTPN20Q4JDL3 420 aa15.03■□□□□ -0
LDB3-207ENST00000542786 TLK2Q86UE8 772 aa15.03■□□□□ -0
LDB3-207ENST00000542786 NT5DC4Q86YG4 428 aa15.03■□□□□ -0
LDB3-207ENST00000542786 ITGA11Q9UKX5 1188 aa15.03■□□□□ -0
LDB3-207ENST00000542786 MTUS1Q9ULD2 1270 aa15.03■□□□□ -0
LDB3-207ENST00000542786 GOLGA8KD6RF30 607 aa15.03■□□□□ -0
LDB3-207ENST00000542786 OPA1O60313 960 aa15.03■□□□□ -0
LDB3-207ENST00000542786 PPFIA2O75334 1257 aa15.03■□□□□ -0
LDB3-207ENST00000542786 ERLIN2O94905 339 aa15.03■□□□□ -0
LDB3-207ENST00000542786 KRT19P08727 400 aa15.03■□□□□ -0
LDB3-207ENST00000542786 TCF4P15884 667 aa15.03■□□□□ -0
LDB3-207ENST00000542786 HOXC8P31273 242 aa15.03■□□□□ -0
LDB3-207ENST00000542786 GSCP56915 257 aaPredicted RBP15.03■□□□□ -0
LDB3-207ENST00000542786 INCA1Q0VD86 236 aa15.03■□□□□ -0
LDB3-207ENST00000542786 DCAF4L1Q3SXM0 396 aa15.03■□□□□ -0
LDB3-207ENST00000542786 CCDC137Q6PK04 289 aaKnown RBP15.03■□□□□ -0
LDB3-207ENST00000542786 LRIG3Q6UXM1 1119 aa15.03■□□□□ -0
LDB3-207ENST00000542786 RHOT1Q8IXI2 618 aa15.03■□□□□ -0
LDB3-207ENST00000542786 NIPA2Q8N8Q9 360 aa15.03■□□□□ -0
LDB3-207ENST00000542786 RUNDC3BQ96NL0 473 aa15.03■□□□□ -0
LDB3-207ENST00000542786 ACAP3Q96P50 834 aa15.03■□□□□ -0
LDB3-207ENST00000542786 IP6K2Q9UHH9 426 aa15.03■□□□□ -0
LDB3-207ENST00000542786 DARSP14868 501 aaKnown RBP15.02■□□□□ -0
LDB3-207ENST00000542786 RPL21P46778 160 aaKnown RBP15.02■□□□□ -0
LDB3-207ENST00000542786 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
LDB3-207ENST00000542786 MFSD10Q14728 455 aa15.02■□□□□ -0
LDB3-207ENST00000542786 TAF1CQ15572 869 aaPredicted RBP15.02■□□□□ -0
LDB3-207ENST00000542786 ZBTB6Q15916 424 aa15.02■□□□□ -0
LDB3-207ENST00000542786 LRRC38Q5VT99 294 aa15.02■□□□□ -0
LDB3-207ENST00000542786 C3orf20Q8ND61 904 aa15.02■□□□□ -0
LDB3-207ENST00000542786 EXD1Q8NHP7 514 aa15.02■□□□□ -0
LDB3-207ENST00000542786 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.02■□□□□ -0
LDB3-207ENST00000542786 PPP1R13LQ8WUF5 828 aa15.02■□□□□ -0
LDB3-207ENST00000542786 LRRC45Q96CN5 670 aa15.02■□□□□ -0
LDB3-207ENST00000542786 HPDLQ96IR7 371 aa15.02■□□□□ -0
LDB3-207ENST00000542786 SNX27Q96L92 541 aa15.02■□□□□ -0
LDB3-207ENST00000542786 TRIM31Q9BZY9 425 aa15.02■□□□□ -0
LDB3-207ENST00000542786 FAM49AQ9H0Q0 323 aaPredicted RBP15.02■□□□□ -0
LDB3-207ENST00000542786 EPB41L4BQ9H329 900 aa15.02■□□□□ -0
LDB3-207ENST00000542786 FAM124BQ9H5Z6 455 aaPredicted RBP15.02■□□□□ -0
LDB3-207ENST00000542786 CITO14578 2027 aa15.02□□□□□ -0.01
LDB3-207ENST00000542786 KAT6AQ92794 2004 aa15.02□□□□□ -0.01
LDB3-207ENST00000542786 PODXLO00592 558 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 TP73O15350 636 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 PSEN2P49810 448 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 LACTBP83111 547 aaPredicted RBP15.01□□□□□ -0.01
LDB3-207ENST00000542786 DNAJC24Q6P3W2 148 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 SCLT1Q96NL6 688 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 PLVAPQ9BX97 442 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 GCOM2Q9BZD3 368 aaPredicted RBP15.01□□□□□ -0.01
LDB3-207ENST00000542786 PLEKHA5Q9HAU0 1116 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 DPP3Q9NY33 737 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 TJP2Q9UDY2 1190 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 RASAL2Q9UJF2 1139 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 AGAP1Q9UPQ3 857 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 PLAAQ9Y263 795 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 R3HDM2Q9Y2K5 976 aaKnown RBP15.01□□□□□ -0.01
LDB3-207ENST00000542786 DERAQ9Y315 318 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 SNX24Q9Y343 169 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 NEU2Q9Y3R4 380 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 NPTXRO95502 500 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 CYP3A5P20815 502 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 KCNJ1P48048 391 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 ZNF157P51786 506 aaPredicted RBP15.01□□□□□ -0.01
LDB3-207ENST00000542786 RBP5P82980 135 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 CDC42EP1Q00587 391 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 TAP1Q03518 808 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 TMEM62Q0P6H9 643 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 ORC1Q13415 861 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 CYP4A22Q5TCH4 519 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 ALKAL1Q6UXT8 129 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 ERICH1Q86X53 443 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 IFNL1Q8IU54 200 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 C1orf54Q8WWF1 131 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 ZMAT2Q96NC0 199 aaKnown RBP15.01□□□□□ -0.01
LDB3-207ENST00000542786 MCEEQ96PE7 176 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 FMO2Q99518 471 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 ADPGKQ9BRR6 497 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 EIF2AQ9BY44 585 aaKnown RBP15.01□□□□□ -0.01
LDB3-207ENST00000542786 DCLK3Q9C098 648 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 CHST7Q9NS84 486 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 LCMT1Q9UIC8 334 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms