RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 TSGA10Q9BZW7 698 aa14.15□□□□□ -0.14
CHFR-221ENST00000542714 LUC7LQ9NQ29 371 aaKnown RBP14.15□□□□□ -0.14
CHFR-221ENST00000542714 INTUQ9ULD6 942 aa14.15□□□□□ -0.14
CHFR-221ENST00000542714 L1RE1Q9UN81 338 aa14.15□□□□□ -0.14
CHFR-221ENST00000542714 PAXBP1Q9Y5B6 917 aa14.15□□□□□ -0.14
CHFR-221ENST00000542714 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.15□□□□□ -0.14
CHFR-221ENST00000542714 BTNL10A8MVZ5 291 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 KIF2AO00139 706 aaPredicted RBP14.14□□□□□ -0.15
CHFR-221ENST00000542714 HCRTO43612 131 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 KRT86O43790 486 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 RTN2O75298 545 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 TACC1O75410 805 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 TMEM253P0C7T8 217 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 GZMAP12544 262 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 UNGP13051 313 aaPredicted RBP14.14□□□□□ -0.15
CHFR-221ENST00000542714 EN2P19622 333 aaPredicted RBP14.14□□□□□ -0.15
CHFR-221ENST00000542714 RPL9P32969 192 aaKnown RBP14.14□□□□□ -0.15
CHFR-221ENST00000542714 GATMP50440 423 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 DSC1Q08554 894 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 TUSC3Q13454 348 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 UPP1Q16831 310 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 NOMO2Q5JPE7 1267 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 GLB1LQ6UWU2 654 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 SYT10Q6XYQ8 523 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 OSTM1Q86WC4 334 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 SLC35F6Q8N357 371 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 TTC39CQ8N584 583 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 ARHGEF26Q96DR7 871 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 PCDH10Q9P2E7 1040 aa14.14□□□□□ -0.15
CHFR-221ENST00000542714 PUF60Q9UHX1 559 aaKnown RBP14.14□□□□□ -0.15
CHFR-221ENST00000542714 MACROD2A1Z1Q3 448 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 KIF5CO60282 957 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 DDHD2O94830 711 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 MOCS3O95396 460 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 TIMP1P01033 207 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 FTLP02792 175 aaPredicted RBP14.13□□□□□ -0.15
CHFR-221ENST00000542714 RFC2P35250 354 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 AARSP49588 968 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHFR-221ENST00000542714 GNG11P61952 73 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 NOMO3P69849 1222 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 ZNF569Q5MCW4 686 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 ACAD10Q6JQN1 1059 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 CNKSR3Q6P9H4 555 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 TRIM72Q6ZMU5 477 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 ZNF280BQ86YH2 543 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 PASD1Q8IV76 773 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 TXLNBQ8N3L3 684 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 PDCL2Q8N4E4 241 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 TOP6BLQ8N6T0 577 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 CYFIP2Q96F07 1278 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 TMEM176AQ96HP8 235 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 CASD1Q96PB1 797 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 TBC1D13Q9NVG8 400 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 PCDHGC3Q9UN70 934 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 CAPN6Q9Y6Q1 641 aa14.13□□□□□ -0.15
CHFR-221ENST00000542714 VWA8A3KMH1 1905 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 ANKRD62A6NC57 917 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 F8W810 466 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 CYB561D2O14569 222 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 BUB1O43683 1085 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 TUBB4AP04350 444 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 VDRP11473 427 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 WARSP23381 471 aaKnown RBP14.12□□□□□ -0.15
CHFR-221ENST00000542714 CENPCQ03188 943 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 NAA35Q5VZE5 725 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 DENND1BQ6P3S1 775 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHFR-221ENST00000542714 ADGRF2Q8IZF7 708 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 URGCPQ8TCY9 931 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 SECISBP2LQ93073 1101 aaKnown RBP14.12□□□□□ -0.15
CHFR-221ENST00000542714 DDX27Q96GQ7 796 aaKnown RBP14.12□□□□□ -0.15
CHFR-221ENST00000542714 SENP8Q96LD8 212 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 UROC1Q96N76 676 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 NT5C1AQ9BXI3 368 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 THAP2Q9H0W7 228 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 DPEP3Q9H4B8 488 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 PRDM5Q9NQX1 630 aaPredicted RBP14.12□□□□□ -0.15
CHFR-221ENST00000542714 MYO1AQ9UBC5 1043 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 DNAI1Q9UI46 699 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 PCDHB7Q9Y5E2 793 aa14.12□□□□□ -0.15
CHFR-221ENST00000542714 A0A0A6YYK5 440 aaPredicted RBP14.11□□□□□ -0.15
CHFR-221ENST00000542714 O00370 1275 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 KIF4AO95239 1232 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 ITGB1P05556 798 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 CD19P15391 556 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 ABCB4P21439 1286 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 CDH5P33151 784 aaPredicted RBP14.11□□□□□ -0.15
CHFR-221ENST00000542714 PTP4A2Q12974 167 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 TIGD5Q53EQ6 642 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 DNTTIP2Q5QJE6 756 aaKnown RBP14.11□□□□□ -0.15
CHFR-221ENST00000542714 WSCD1Q658N2 575 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 MON1BQ7L1V2 547 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 ACOT1Q86TX2 421 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 UNC93AQ86WB7 457 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 NPAS4Q8IUM7 802 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 COLGALT2Q8IYK4 626 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 WDTC1Q8N5D0 677 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 RNF10Q8N5U6 811 aaKnown RBP14.11□□□□□ -0.15
CHFR-221ENST00000542714 APPL2Q8NEU8 664 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 CPA5Q8WXQ8 436 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms