RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TMCO3Q6UWJ1 677 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 GBP6Q6ZN66 633 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 GPRIN1Q7Z2K8 1008 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 GDF7Q7Z4P5 450 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 TMTC2Q8N394 836 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 CCDC26Q8TAB7 109 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 SNRNP27Q8WVK2 155 aaKnown RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 FAXDC2Q96IV6 333 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 EIF3CQ99613 913 aaKnown RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 THUMPD2Q9BTF0 503 aaKnown RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 SLC46A2Q9BY10 475 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 TRIM6Q9C030 488 aaPredicted RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 TMX1Q9H3N1 280 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 VEZTQ9HBM0 779 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 HOMER3Q9NSC5 361 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 GPRC5DQ9NZD1 345 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 CPSF2Q9P2I0 782 aaKnown RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 CLCA2Q9UQC9 943 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 TULP4Q9NRJ4 1543 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 N4BP2Q86UW6 1770 aaPredicted RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 AK9Q5TCS8 1911 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 CAMSAP1Q5T5Y3 1602 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 KIDINS220Q9ULH0 1771 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 ABCC3O15438 1527 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 LPXNO60711 386 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 GCP02774 474 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 ELF1P32519 619 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 RNASE9P60153 205 aaKnown RBP6.57□□□□□ -1.36
XRCC4-206ENST00000542685 NANOS3P60323 173 aaKnown RBP6.57□□□□□ -1.36
XRCC4-206ENST00000542685 CCT2P78371 535 aaKnown RBP6.57□□□□□ -1.36
XRCC4-206ENST00000542685 NHLH2Q02577 135 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 GRIK3Q13003 919 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 TMED1Q13445 227 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 SLC5A9Q2M3M2 681 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 CCDC183Q5T5S1 534 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 C1QTNF12Q5T7M4 302 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 EFCAB12Q6NXP0 572 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 KIAA1328Q86T90 577 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 SYT12Q8IV01 421 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 RNF169Q8NCN4 708 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 OR10H5Q8NGA6 315 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 CEP95Q96GE4 821 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 CFAP53Q96M91 514 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 ACAP3Q96P50 834 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 DCLRE1CQ96SD1 692 aaKnown RBP6.57□□□□□ -1.36
XRCC4-206ENST00000542685 MMTAG2Q9BU76 263 aaKnown RBP6.57□□□□□ -1.36
XRCC4-206ENST00000542685 KRTAP17-1Q9BYP8 105 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 CHCHD3Q9NX63 227 aaKnown RBP6.57□□□□□ -1.36
XRCC4-206ENST00000542685 HS3ST4Q9Y661 456 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 RPS6KL1Q9Y6S9 549 aa6.57□□□□□ -1.36
XRCC4-206ENST00000542685 NEXMIFQ5QGS0 1516 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 RPTORQ8N122 1335 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 CENPVL1A0A0U1RR11 272 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 B5MCH6 92 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 KINO60870 393 aaKnown RBP6.56□□□□□ -1.36
XRCC4-206ENST00000542685 NCR1O76036 304 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 ENPP1P22413 925 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 ABCD1P33897 745 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 TUBB4BP68371 445 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 NUCB1Q02818 461 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 FILIP1LQ4L180 1135 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 PRAMEF14Q5SWL7 426 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 PDZD4Q76G19 769 aaPredicted RBP6.56□□□□□ -1.36
XRCC4-206ENST00000542685 DNAJC10Q8IXB1 793 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 CMIPQ8IY22 773 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 SDR16C5Q8N3Y7 309 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 TCP11L2Q8N4U5 519 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 DRAXINQ8NBI3 349 aaPredicted RBP6.56□□□□□ -1.36
XRCC4-206ENST00000542685 NEK11Q8NG66 645 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 BICD2Q8TD16 824 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 TGFBRAP1Q8WUH2 860 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 ZNF480Q8WV37 535 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 GCC1Q96CN9 775 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 TEX101Q9BY14 249 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 UBA5Q9GZZ9 404 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 TTC12Q9H892 705 aaPredicted RBP6.56□□□□□ -1.36
XRCC4-206ENST00000542685 AKIP1Q9NQ31 210 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 APOBEC2Q9Y235 224 aaKnown RBP6.56□□□□□ -1.36
XRCC4-206ENST00000542685 CD109Q6YHK3 1445 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 AATKQ6ZMQ8 1374 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 PNPLA6Q8IY17 1366 aa6.56□□□□□ -1.36
XRCC4-206ENST00000542685 RPGRIP1LQ68CZ1 1315 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 TLDC2A0PJX2 215 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 TBKBP1A7MCY6 615 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 RNASET2O00584 256 aaKnown RBP6.55□□□□□ -1.36
XRCC4-206ENST00000542685 ADCY6O43306 1168 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 SNUPNO95149 360 aaKnown RBP6.55□□□□□ -1.36
XRCC4-206ENST00000542685 NDUFA10O95299 355 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 CAVIN2O95810 425 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 GASTP01350 101 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 ADSLP30566 484 aaPredicted RBP6.55□□□□□ -1.36
XRCC4-206ENST00000542685 NF2P35240 595 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 MCM2P49736 904 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 MNAT1P51948 309 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 SLC8A3P57103 927 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 COL10A1Q03692 680 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 MYBPC2Q14324 1141 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 PDIA5Q14554 519 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 AMOTQ4VCS5 1084 aa6.55□□□□□ -1.36
XRCC4-206ENST00000542685 CCDC158Q5M9N0 1113 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms