RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 NOL7Q9UMY1 257 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-214ENST00000542663 HELZP42694 1942 aaKnown RBP19.37■□□□□ 0.69
CLSTN3-214ENST00000542663 LACTBL1A8MY62 500 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 DPYSL4O14531 572 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 FAM189A1O60320 539 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 CLTAP09496 248 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 TYMPP19971 482 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 U2AF2P26368 475 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 WEE1P30291 646 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 DSTYKQ6XUX3 929 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 FAM200AQ8TCP9 573 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 BPIFB1Q8TDL5 484 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 CHFRQ96EP1 664 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 IL21Q9HBE4 155 aa19.36■□□□□ 0.69
CLSTN3-214ENST00000542663 AXIN1O15169 862 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 ZNF806P0C7X5 589 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 KCNA4P22459 653 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 PMLP29590 882 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 RAP1GAPP47736 663 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 PXNP49023 591 aaPredicted RBP19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 CYP4F8P98187 520 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 PPP2R3AQ06190 1150 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 GNL2Q13823 731 aaKnown RBP19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 ENOX2Q16206 610 aaKnown RBP19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 AASDHQ4L235 1098 aaPredicted RBP19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 N4BP2L1Q5TBK1 243 aaPredicted RBP19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 HAUS6Q7Z4H7 955 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 OR10T2Q8NGX3 314 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 GAB3Q8WWW8 586 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 DDX1Q92499 740 aaKnown RBP19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 PNMA5Q96PV4 448 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 LPIN3Q9BQK8 851 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 LLPHQ9BRT6 129 aaKnown RBP19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 HSFX1Q9UBD0 423 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 PTPRDP23468 1912 aa19.35■□□□□ 0.69
CLSTN3-214ENST00000542663 EPN2O95208 641 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 FGF19O95750 216 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 ADRB2P07550 413 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 ATF6P18850 670 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 PRPHP41219 470 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 MATR3P43243 847 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 CDR1P51861 262 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 SMTNP53814 917 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 LILRA4P59901 499 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 PLCB2Q00722 1185 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 ITPRIPL2Q3MIP1 535 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 ARHGAP15Q53QZ3 475 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 IL31Q6EBC2 164 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 KBTBD6Q86V97 674 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 SYT2Q8N9I0 419 aaPredicted RBP19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 LOXL4Q96JB6 756 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 SMG9Q9H0W8 520 aaKnown RBP19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 TASP1Q9H6P5 420 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 ANGPTL2Q9UKU9 493 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 LIMCH1Q9UPQ0 1083 aa19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.34■□□□□ 0.69
CLSTN3-214ENST00000542663 NPHP3-ACAD11A0A0J9YXS1 232 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 LAD1O00515 517 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 SLC12A3P55017 1021 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 NCKAP1LP55160 1127 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 HYIQ5T013 277 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 SPATA1Q5VX52 437 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 FSTL4Q6MZW2 842 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 ITIH5Q86UX2 942 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 SENP8Q96LD8 212 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 SLC46A2Q9BY10 475 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 THADAQ6YHU6 1953 aa19.33■□□□□ 0.68
CLSTN3-214ENST00000542663 CCDC163A0A0D9SF12 145 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 OTOL1A6NHN0 477 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 RPP40O75818 363 aaKnown RBP19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 ODC1P11926 461 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 MCM2P49736 904 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 SHC2P98077 582 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 TMEM196Q5HYL7 178 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 PLA2G2CQ5R387 149 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 JADE1Q6IE81 842 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 ARMCX5Q6P1M9 558 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 DTHD1Q6ZMT9 781 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 CACNA2D4Q7Z3S7 1137 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 C12orf50Q8NA57 414 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 KCNN1Q92952 543 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 PLIN2Q99541 437 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 FAM83CQ9BQN1 747 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 SMOC1Q9H4F8 434 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 HPS4Q9NQG7 708 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 POLR3BQ9NW08 1133 aaPredicted RBP19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 KCNG1Q9UIX4 513 aa19.32■□□□□ 0.68
CLSTN3-214ENST00000542663 XPOTO43592 962 aaKnown RBP19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 CYP11A1P05108 521 aa19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 HMGN5P82970 282 aaKnown RBP19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 ZRSR1Q15695 479 aaKnown RBP19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 SLC39A12Q504Y0 691 aa19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 ARSHQ5FYA8 562 aa19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 STPG1Q5TH74 334 aa19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 C9orf57Q5W0N0 161 aa19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 TMEM150AQ86TG1 271 aa19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 BICD1Q96G01 975 aa19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 SEPT5Q99719 369 aaPredicted RBP19.31■□□□□ 0.68
CLSTN3-214ENST00000542663 ZCWPW1Q9H0M4 648 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms