RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 IGSF1Q8N6C5 1336 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 POLRMTO00411 1230 aaKnown RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 PLOD1Q02809 727 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CAMK2GQ13555 558 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 POLD3Q15054 466 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CYP4Z1Q86W10 505 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 DHX40Q8IX18 779 aaKnown RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CPA5Q8WXQ8 436 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 RMND5AQ9H871 391 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CYP39A1Q9NYL5 469 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 TRMT6Q9UJA5 497 aaKnown RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 H7C4K7 107 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 TEX28O15482 410 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 MTSS1O43312 755 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 GTF2E2P29084 291 aaKnown RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CASP1P29466 404 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 GYS2P54840 703 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 PTK7Q13308 1070 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 NCOA4Q13772 614 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 COG2Q14746 738 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 GOLGA7BQ2TAP0 167 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 ICE2Q659A1 982 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 C1orf131Q8NDD1 294 aaKnown RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 MAGEB10Q96LZ2 347 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 NFIBO00712 420 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 STAG3L1P0CL83 205 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 SERPINB1P30740 379 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 GPC1P35052 558 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 SOX11P35716 441 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 EFHC1Q5JVL4 640 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 NAPEPLDQ6IQ20 393 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 LINC00523Q86TU6 105 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CAMKK2Q96RR4 588 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 NT5C1AQ9BXI3 368 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 DCP1AQ9NPI6 582 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CTTNBP2Q8WZ74 1663 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 UNC13AQ9UPW8 1703 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 TRPC5OSA6NMA1 111 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 EIF4E1BA6NMX2 242 aaKnown RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 AIM2O14862 343 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 LARGE1O95461 756 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 TDP2O95551 362 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 CPT1AP50416 773 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 RBBP8NLQ8NC74 664 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 RSPH1Q8WYR4 309 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 TMEM143Q96AN5 459 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 SH3GL3Q99963 347 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 SLC24A3Q9HC58 644 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 MAP10Q9P2G4 905 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 NAGPAQ9UK23 515 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 C19orf81C9J6K1 198 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 KRT75O95678 551 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ITIH2P19823 946 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 GRK3P35626 688 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 SLC11A2P49281 568 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 YWHAZP63104 245 aaKnown RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ZNF177Q13360 481 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 OXER1Q8TDS5 423 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 DTNBP1Q96EV8 351 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 SMAD5Q99717 465 aaKnown RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ECSITQ9BQ95 431 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 TUBGCP4Q9UGJ1 667 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 HACL1Q9UJ83 578 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 PRR23AA6NEV1 266 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 SMAPO00193 183 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 TFRCP02786 760 aaKnown RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 GPD1P21695 349 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 BTKQ06187 659 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ACTN3Q08043 901 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 SREBF2Q12772 1141 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 DAB2IPQ5VWQ8 1189 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 CCDC81Q6ZN84 652 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 MICU2Q8IYU8 434 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ZNF614Q8N883 585 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 RIN2Q8WYP3 895 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 MTERF3Q96E29 417 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 CYFIP2Q96F07 1278 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 COLEC11Q9BWP8 271 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 IL1RL2Q9HB29 575 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ODC1P11926 461 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 JAK1P23458 1154 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 PTPN7P35236 360 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 EMC2Q15006 297 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 AGGF1Q8N302 714 aaeCLIP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 SLC44A5Q8NCS7 719 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 SEPT1Q8WYJ6 367 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 APEX2Q9UBZ4 518 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 PNMA8BQ9ULN7 279 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 DYRK1BQ9Y463 629 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 PZPP20742 1482 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ARHGAP31Q2M1Z3 1444 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 C2orf81A6NN90 581 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 H7C1W4 665 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 STX7O15400 261 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms