RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 B4GALT3O60512 393 aa29.69■■■□□ 2.34
CCM2-218ENST00000541586 PBX3P40426 434 aa29.69■■■□□ 2.34
CCM2-218ENST00000541586 GNG11P61952 73 aa29.69■■■□□ 2.34
CCM2-218ENST00000541586 SOX4Q06945 474 aaPredicted RBP29.69■■■□□ 2.34
CCM2-218ENST00000541586 KIF5AQ12840 1032 aa29.69■■■□□ 2.34
CCM2-218ENST00000541586 TAF4BQ92750 862 aa29.69■■■□□ 2.34
CCM2-218ENST00000541586 AGPAT1Q99943 283 aa29.69■■■□□ 2.34
CCM2-218ENST00000541586 CWH43Q9H720 699 aa29.69■■■□□ 2.34
CCM2-218ENST00000541586 ACP6Q9NPH0 428 aa29.69■■■□□ 2.34
CCM2-218ENST00000541586 NOCTQ9UK39 431 aaKnown RBP29.69■■■□□ 2.34
CCM2-218ENST00000541586 UBQLN1Q9UMX0 589 aaKnown RBP29.69■■■□□ 2.34
CCM2-218ENST00000541586 KIF5CO60282 957 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 OR1G1P47890 313 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 NAB2Q15742 525 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 ZBTB6Q15916 424 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 ALKBH5Q6P6C2 394 aaKnown RBP29.68■■■□□ 2.34
CCM2-218ENST00000541586 NOP9Q86U38 636 aaKnown RBP29.68■■■□□ 2.34
CCM2-218ENST00000541586 BEST2Q8NFU1 509 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 RSPH1Q8WYR4 309 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 TSGA10Q9BZW7 698 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 LUC7LQ9NQ29 371 aaKnown RBP29.68■■■□□ 2.34
CCM2-218ENST00000541586 DUSP10Q9Y6W6 482 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 NT5C1B-RDH14C9J2C7 533 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 POLR2BP30876 1174 aaKnown RBP29.68■■■□□ 2.34
CCM2-218ENST00000541586 TUSC3Q13454 348 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 COLGALT2Q8IYK4 626 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 PAAF1Q9BRP4 392 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 NKX2-4Q9H2Z4 354 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 DNAI1Q9UI46 699 aa29.68■■■□□ 2.34
CCM2-218ENST00000541586 XPOTO43592 962 aaKnown RBP29.67■■■□□ 2.34
CCM2-218ENST00000541586 ALDH2P05091 517 aa29.67■■■□□ 2.34
CCM2-218ENST00000541586 CYP11B1P15538 503 aa29.67■■■□□ 2.34
CCM2-218ENST00000541586 TNFAIP3P21580 790 aa29.67■■■□□ 2.34
CCM2-218ENST00000541586 C10orf76Q5T2E6 689 aa29.67■■■□□ 2.34
CCM2-218ENST00000541586 TXLNBQ8N3L3 684 aa29.67■■■□□ 2.34
CCM2-218ENST00000541586 SP7Q8TDD2 431 aaPredicted RBP29.67■■■□□ 2.34
CCM2-218ENST00000541586 WDR24Q96S15 920 aa29.67■■■□□ 2.34
CCM2-218ENST00000541586 AGAP1Q9UPQ3 857 aa29.67■■■□□ 2.34
CCM2-218ENST00000541586 PCDHB4Q9Y5E5 795 aa29.67■■■□□ 2.34
CCM2-218ENST00000541586 TDRD15B5MCY1 1934 aaKnown RBP29.67■■■□□ 2.34
CCM2-218ENST00000541586 COL4A6Q14031 1691 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 A0A1W2PPC1 479 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 PJA2O43164 708 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 ARHGEF15O94989 841 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 ATICP31939 592 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 ALDH7A1P49419 539 aaKnown RBP29.66■■■□□ 2.34
CCM2-218ENST00000541586 RAB30Q15771 203 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 UBR7Q8N806 425 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 TSPAN18Q96SJ8 248 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 MTUS1Q9ULD2 1270 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 CNTN6Q9UQ52 1028 aa29.66■■■□□ 2.34
CCM2-218ENST00000541586 PRG3Q9Y2Y8 225 aaPredicted RBP29.66■■■□□ 2.34
CCM2-218ENST00000541586 LINC01553A4QN01 128 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 ASPAP45381 313 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 PDE6CP51160 858 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 CLCNKBP51801 687 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 BCAR1P56945 870 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 RBP5P82980 135 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 DSC1Q08554 894 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 KIF18AQ8NI77 898 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 PACSIN1Q9BY11 444 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 NXF1Q9UBU9 619 aaKnown RBP29.65■■■□□ 2.34
CCM2-218ENST00000541586 R3HCC1Q9Y3T6 440 aaKnown RBP29.65■■■□□ 2.34
CCM2-218ENST00000541586 FANCGO15287 622 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 CHRNB2P17787 502 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 WDR72Q3MJ13 1102 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 ZNF667Q5HYK9 610 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 TAF3Q5VWG9 929 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 TMEM270Q6UE05 265 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 SPRED2Q7Z698 418 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 VRTNQ9H8Y1 702 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 SEPT11Q9NVA2 429 aaKnown RBP29.65■■■□□ 2.34
CCM2-218ENST00000541586 POLIQ9UNA4 740 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 FAN1Q9Y2M0 1017 aa29.65■■■□□ 2.34
CCM2-218ENST00000541586 NRP1O14786 923 aa29.64■■■□□ 2.34
CCM2-218ENST00000541586 GALTP07902 379 aa29.64■■■□□ 2.34
CCM2-218ENST00000541586 DNAJB2P25686 324 aa29.64■■■□□ 2.34
CCM2-218ENST00000541586 ZNF569Q5MCW4 686 aa29.64■■■□□ 2.34
CCM2-218ENST00000541586 SCARA5Q6ZMJ2 495 aa29.64■■■□□ 2.34
CCM2-218ENST00000541586 PALB2Q86YC2 1186 aa29.64■■■□□ 2.34
CCM2-218ENST00000541586 HPDLQ96IR7 371 aa29.64■■■□□ 2.34
CCM2-218ENST00000541586 MYO1AQ9UBC5 1043 aa29.64■■■□□ 2.34
CCM2-218ENST00000541586 CYP3A5P20815 502 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 SLC11A1P49279 550 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 SMAD3P84022 425 aaKnown RBP29.63■■■□□ 2.33
CCM2-218ENST00000541586 LRIT3Q3SXY7 679 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 KCNT2Q6UVM3 1135 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 DNAAF5Q86Y56 855 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 DDX1Q92499 740 aaKnown RBP29.63■■■□□ 2.33
CCM2-218ENST00000541586 FAXDC2Q96IV6 333 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 CERS4Q9HA82 394 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 SLC28A3Q9HAS3 691 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 GBF1Q92538 1859 aa29.63■■■□□ 2.33
CCM2-218ENST00000541586 CALCAP01258 141 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 MMEP08473 750 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 WEE2P0C1S8 567 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 BPIFB4P59827 614 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 CDR2Q01850 454 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 PPP2R2DQ66LE6 453 aa29.62■■■□□ 2.33
CCM2-218ENST00000541586 RBBP8NLQ8NC74 664 aaPredicted RBP29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms