RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 MIGA2Q7L4E1 593 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF614Q8N883 585 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 RMDN3Q96TC7 470 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 WWOXQ9NZC7 414 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 SOAT2O75908 522 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 RPN2P04844 631 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 POTEIP0CG38 1075 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 SFNP31947 248 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 C2CD6Q53TS8 623 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 RAD54LQ92698 747 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16■□□□□ 0.15
HMGA2-210ENST00000541363 B2RBV5 119 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 KYNUQ16719 465 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 GPD1LQ8N335 351 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 ENKURQ8TC29 256 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 S100A13Q99584 98 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 OSBPL8Q9BZF1 889 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16■□□□□ 0.15
HMGA2-210ENST00000541363 COPG2Q9UBF2 871 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 NCK2O43639 380 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 CDC40O60508 579 aaKnown RBP eCLIP16■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF23P17027 643 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 MAPK1P28482 360 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 RALGDSQ12967 914 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 TCEAL5Q5H9L2 206 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 CDC73Q6P1J9 531 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 LAYNQ6UX15 382 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 POLR3FQ9H1D9 316 aaPredicted RBP16■□□□□ 0.15
HMGA2-210ENST00000541363 HOXC10Q9NYD6 342 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 GRID1Q9ULK0 1009 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 ZMYM3Q14202 1370 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 CHL1O00533 1208 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 ZBTB39O15060 712 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 BCAP31P51572 246 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 PTPN12Q05209 780 aaKnown RBP16■□□□□ 0.15
HMGA2-210ENST00000541363 FBXO42Q6P3S6 717 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 TRIM39Q9HCM9 518 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 RAB6BQ9NRW1 208 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 FEM1BQ9UK73 627 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 PLXNC1O60486 1568 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 IFNA14P01570 189 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 EIF2B2P49770 351 aaKnown RBP16■□□□□ 0.15
HMGA2-210ENST00000541363 DDR2Q16832 855 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 FBXO40Q9UH90 709 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 ZHX2Q9Y6X8 837 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 COPAP53621 1224 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 DYNLL1P63167 89 aaKnown RBP16■□□□□ 0.15
HMGA2-210ENST00000541363 COASYQ13057 564 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF746Q6NUN9 644 aaPredicted RBP16■□□□□ 0.15
HMGA2-210ENST00000541363 RFFLQ8WZ73 363 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 MCRS1Q96EZ8 462 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 CNPY3Q9BT09 278 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 SLC39A10Q9ULF5 831 aa16■□□□□ 0.15
HMGA2-210ENST00000541363 KANSL1LA0AUZ9 987 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 PSTPIP1O43586 416 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 CLTBP09497 229 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 NUDT2P50583 147 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 CHRNB3Q05901 458 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 STX5Q13190 355 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 PKP1Q13835 747 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 MFSD14CQ5VZR4 134 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 CDK20Q8IZL9 346 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 SGSM3Q96HU1 749 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 SEC16BQ96JE7 1060 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 COQ6Q9Y2Z9 468 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 MEI4A8MW99 385 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 SPAG6O75602 509 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 LRIG3Q6UXM1 1119 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 UBASH3BQ8TF42 649 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 PHF2O75151 1096 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 TTLL9Q3SXZ7 439 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 TIGD7Q6NT04 549 aaPredicted RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 RCOR1Q9UKL0 485 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 CCT3P49368 545 aaKnown RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 LBHD1Q9BQE6 289 aaPredicted RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 A0A087WWV3 80 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 ESYT3A0FGR9 886 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 KPNA4O00629 521 aaPredicted RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 TADA2AO75478 443 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 PTPN7P35236 360 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 ADD2P35612 726 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 DPYDQ12882 1025 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 TAF2Q6P1X5 1199 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 RIBC1Q8N443 379 aaPredicted RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 SCFD2Q8WU76 684 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 SLC25A13Q9UJS0 675 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 PSMD14O00487 310 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 CDH16O75309 829 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 IRF1P10914 325 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 BTN2A1Q7KYR7 527 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF624Q9P2J8 865 aaPredicted RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 RWDD3Q9Y3V2 267 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 CHRM3P20309 590 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 ADORA1P30542 326 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 PIGHQ14442 188 aaPredicted RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 TSNQ15631 228 aaKnown RBP15.99■□□□□ 0.15
HMGA2-210ENST00000541363 FAM83EQ2M2I3 478 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 FBXW10Q5XX13 1052 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 FAM9CQ8IZT9 166 aa15.99■□□□□ 0.15
HMGA2-210ENST00000541363 POMGNT2Q8NAT1 580 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms