RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 INSRRP14616 1297 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 PCK1P35558 622 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 SLC8A3P57103 927 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 MAPK7Q13164 816 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 LONRF1Q17RB8 773 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 LACTB2Q53H82 288 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ERMARDQ5T6L9 678 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 CDCA2Q69YH5 1023 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 TMEM130Q8N3G9 435 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 DHX38Q92620 1227 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 BORCS6Q96GS4 357 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 GPR88Q9GZN0 384 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 TUT1Q9H6E5 874 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ETAA1Q9NY74 926 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 NKX1-2Q9UD57 310 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 MTRF1LQ9UGC7 380 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ADGRA3Q8IWK6 1321 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 A0A0A6YYK5 440 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 VTNP04004 478 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 NQO1P15559 274 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 USP4Q13107 963 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 BMT2Q1RMZ1 405 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 FAM47CQ5HY64 1035 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 ATG4AQ8WYN0 398 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 VTI1AQ96AJ9 217 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 MRRFQ96E11 262 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 CARD9Q9H257 536 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 CYP26B1Q9NR63 512 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 TOPORSQ9NS56 1045 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 SLC5A4Q9NY91 659 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 LARSQ9P2J5 1176 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 MAFGO15525 162 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 CLDN3O15551 220 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 TGFB3P10600 412 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 GRK4P32298 578 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 MXI1P50539 228 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 JAK3P52333 1124 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 GPC5P78333 572 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 TTC27Q6P3X3 843 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 MAB21L3Q8N8X9 362 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 PRELID2Q8N945 189 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 NUP85Q9BW27 656 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 PPP1R12CQ9BZL4 782 aa15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 MAFBQ9Y5Q3 323 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-210ENST00000541286 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■□□□□ 9.5
SFSWAP-210ENST00000541286 OATP04181 439 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 SRGAP2CP0DJJ0 459 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 ADCY2Q08462 1091 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 PCDHB18PQ96TA0 734 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 MPHOSPH6Q99547 160 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 PI4K2AQ9BTU6 479 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 HEMGNQ9BXL5 484 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 FAM129AQ9BZQ8 928 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 TUFT1Q9NNX1 390 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 NFASCO94856 1347 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 TCP11X1B4DZS4 312 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 PYGLP06737 847 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 POLE2P56282 527 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 CALCOCO2Q13137 446 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 FSCN1Q16658 493 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 DUPD1Q68J44 220 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 LLGL2Q6P1M3 1020 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 PWWP2AQ96N64 755 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 DEFB118Q96PH6 123 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 PAIP2Q9BPZ3 127 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 ADAM33Q9BZ11 813 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 PABPC3Q9H361 631 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 KAT6AQ92794 2004 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 GTPBP10A4D1E9 387 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 KIAA0391O15091 583 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 STAM2O75886 525 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 SNUPNO95149 360 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 ATG7O95352 703 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 EDN1P05305 212 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 RARAP10276 462 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 RBBP5Q15291 538 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 SEZ6Q53EL9 994 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 AGBL2Q5U5Z8 902 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 NUGGCQ68CJ6 796 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 CBWD2Q8IUF1 395 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 ZDHHC14Q8IZN3 488 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 DDX23Q9BUQ8 820 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 XPNPEP3Q9NQH7 507 aa15.17■□□□□ 0.02
SFSWAP-210ENST00000541286 POLGP54098 1239 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 NCALDP61601 193 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 MXRA7P84157 204 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 NOP9Q86U38 636 aaKnown RBP15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 ZNF564Q8TBZ8 553 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 ASAP3Q8TDY4 903 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 ZNF317Q96PQ6 595 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 TMEM237Q96Q45 408 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 HSPBP1Q9NZL4 362 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 RASGRF2O14827 1237 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms