RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 KHDC1LQ5JSQ8 128 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 FAM102BQ5T8I3 360 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 EMC10Q5UCC4 262 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 CXorf57Q6NSI4 855 aaKnown RBP7.69□□□□□ -1.18
YBX3-210ENST00000540975 MICALCLQ6ZW33 695 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 ADGRG5Q8IZF4 528 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 SLC30A5Q8TAD4 765 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 PPP1R35Q8TAP8 253 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 BRIX1Q8TDN6 353 aaKnown RBP7.69□□□□□ -1.18
YBX3-210ENST00000540975 SSH3Q8TE77 659 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 DDX17Q92841 729 aaKnown RBP7.69□□□□□ -1.18
YBX3-210ENST00000540975 LRFN3Q9BTN0 628 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 CNPPD1Q9BV87 410 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 RSAD1Q9HA92 442 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 KCTD5Q9NXV2 234 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 C11orf21Q9P2W6 132 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 GABBR1Q9UBS5 961 aa7.69□□□□□ -1.18
YBX3-210ENST00000540975 CTNND1O60716 968 aaKnown RBP7.68□□□□□ -1.18
YBX3-210ENST00000540975 KIF20AO95235 890 aa7.68□□□□□ -1.18
YBX3-210ENST00000540975 GNAI2P04899 355 aa7.68□□□□□ -1.18
YBX3-210ENST00000540975 U2AF1L5P0DN76 240 aaPredicted RBP7.68□□□□□ -1.18
YBX3-210ENST00000540975 HTR1BP28222 390 aa7.68□□□□□ -1.18
YBX3-210ENST00000540975 PLA2G5P39877 138 aa7.68□□□□□ -1.18
YBX3-210ENST00000540975 U2AF1Q01081 240 aaKnown RBP eCLIP7.68□□□□□ -1.18
YBX3-210ENST00000540975 EXOSC9Q06265 439 aaKnown RBP7.68□□□□□ -1.18
YBX3-210ENST00000540975 FGL2Q14314 439 aa7.68□□□□□ -1.18
YBX3-210ENST00000540975 TINAGL1Q9GZM7 467 aaPredicted RBP7.68□□□□□ -1.18
YBX3-210ENST00000540975 SARS2Q9NP81 518 aaKnown RBP7.68□□□□□ -1.18
YBX3-210ENST00000540975 VPS4BO75351 444 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 SCGB1D2O95969 90 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 LMNAP02545 664 aaKnown RBP7.67□□□□□ -1.18
YBX3-210ENST00000540975 PREPLQ4J6C6 727 aaPredicted RBP7.67□□□□□ -1.18
YBX3-210ENST00000540975 VWA1Q6PCB0 445 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 PPP1R32Q7Z5V6 425 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 PSD4Q8NDX1 1056 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 FBXO41Q8TF61 875 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 SNX19Q92543 992 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 SLC9A6Q92581 669 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 MTFMTQ96DP5 389 aaKnown RBP7.67□□□□□ -1.18
YBX3-210ENST00000540975 SMOC2Q9H3U7 446 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 SYNPO2LQ9H987 977 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 TCEAL9Q9UHQ7 104 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.67□□□□□ -1.18
YBX3-210ENST00000540975 SPATA31A3Q5VYP0 1347 aa7.67□□□□□ -1.18
YBX3-210ENST00000540975 TOB1P50616 345 aaPredicted RBP7.66□□□□□ -1.18
YBX3-210ENST00000540975 SOX8P57073 446 aa7.66□□□□□ -1.18
YBX3-210ENST00000540975 MINDY4Q4G0A6 757 aa7.66□□□□□ -1.18
YBX3-210ENST00000540975 NXNQ6DKJ4 435 aa7.66□□□□□ -1.18
YBX3-210ENST00000540975 TAF2Q6P1X5 1199 aa7.66□□□□□ -1.18
YBX3-210ENST00000540975 TSHZ1Q6ZSZ6 1077 aa7.66□□□□□ -1.18
YBX3-210ENST00000540975 DAAM2Q86T65 1068 aa7.66□□□□□ -1.18
YBX3-210ENST00000540975 TCEAL8Q8IYN2 117 aa7.66□□□□□ -1.18
YBX3-210ENST00000540975 FAM9AQ8IZU1 332 aaPredicted RBP7.66□□□□□ -1.18
YBX3-210ENST00000540975 CELF5Q8N6W0 485 aaKnown RBP7.66□□□□□ -1.18
YBX3-210ENST00000540975 ZBTB34Q8NCN2 500 aa7.66□□□□□ -1.18
YBX3-210ENST00000540975 ALG13Q9NP73 1137 aaKnown RBP7.66□□□□□ -1.18
YBX3-210ENST00000540975 F5H697 171 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 YY2O15391 372 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 SUV39H1O43463 412 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 PROM1O43490 865 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 PEX1O43933 1283 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 TUSC2O75896 110 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 MYBP10242 640 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 TYRP1P17643 537 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 FOLR3P41439 243 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 NPTX2P47972 431 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 HNRNPMP52272 730 aaKnown RBP eCLIP7.65□□□□□ -1.18
YBX3-210ENST00000540975 INHBEP58166 350 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 RAB1AP62820 205 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 ZNF169Q14929 603 aaPredicted RBP7.65□□□□□ -1.18
YBX3-210ENST00000540975 SMN1Q16637 294 aaKnown RBP7.65□□□□□ -1.18
YBX3-210ENST00000540975 FAM160B1Q5W0V3 765 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 KIAA0895LQ68EN5 471 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 MAGEB6Q8N7X4 407 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 LPIN2Q92539 896 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 ZG16BQ96DA0 208 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 CPA4Q9UI42 421 aa7.65□□□□□ -1.18
YBX3-210ENST00000540975 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.65□□□□□ -1.18
YBX3-210ENST00000540975 M0QYG6 137 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 TSPAN6O43657 245 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 SOAT2O75908 522 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 DNAJB5O75953 348 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 BMP5P22003 454 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 CXCR5P32302 372 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 AGFG1P52594 562 aaKnown RBP7.64□□□□□ -1.19
YBX3-210ENST00000540975 BOP1Q14137 746 aaKnown RBP7.64□□□□□ -1.19
YBX3-210ENST00000540975 OVCH2Q7RTZ1 564 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 PCSK9Q8NBP7 692 aaKnown RBP7.64□□□□□ -1.19
YBX3-210ENST00000540975 RUNDC1Q96C34 613 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 MRGPRX1Q96LB2 322 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 FOXJ2Q9P0K8 574 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 STAP2Q9UGK3 403 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 RAD54BQ9Y620 910 aa7.64□□□□□ -1.19
YBX3-210ENST00000540975 KIAA0355O15063 1070 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 PPM1GO15355 546 aaPredicted RBP7.63□□□□□ -1.19
YBX3-210ENST00000540975 PIM1P11309 404 aaPredicted RBP7.63□□□□□ -1.19
YBX3-210ENST00000540975 CHRM3P20309 590 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 KCNJ5P48544 419 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 RARRES1P49788 294 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 NDUFV1P49821 464 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms