RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 USP38Q8NB14 1042 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 NOA1Q8NC60 698 aaKnown RBP10.16□□□□□ -0.78
PAAF1-209ENST00000540659 TFAP2BQ92481 460 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 LPPQ93052 612 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 TMEM176AQ96HP8 235 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 PAWRQ96IZ0 340 aaKnown RBP10.16□□□□□ -0.78
PAAF1-209ENST00000540659 TWNKQ96RR1 684 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 ZSWIM1Q9BR11 485 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 ELOVL4Q9GZR5 314 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 ADAM22Q9P0K1 906 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 GTF3C4Q9UKN8 822 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 UBQLN1Q9UMX0 589 aaKnown RBP10.16□□□□□ -0.78
PAAF1-209ENST00000540659 SNX9Q9Y5X1 595 aa10.16□□□□□ -0.78
PAAF1-209ENST00000540659 SMIM28A0A1B0GU29 152 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 A0A1W2PQ45 241 aaPredicted RBP10.15□□□□□ -0.78
PAAF1-209ENST00000540659 A0A1W2PQY0 241 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 MEIS3P2A8K0S8 358 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 GPR182O15218 404 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 MED7O43513 233 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 XPOTO43592 962 aaKnown RBP10.15□□□□□ -0.78
PAAF1-209ENST00000540659 CEP104O60308 925 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 GJB6O95452 261 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 RRM1P23921 792 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 NDST1P52848 882 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 RAD23BP54727 409 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 ZBTB6Q15916 424 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 CFAP221Q4G0U5 840 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 ZNF618Q5T7W0 954 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 LIN9Q5TKA1 542 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 C9orf57Q5W0N0 161 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 DENND1BQ6P3S1 775 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 MON1BQ7L1V2 547 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 RPAINQ86UA6 219 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 CPNE8Q86YQ8 564 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 SLC4A11Q8NBS3 891 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 RNF169Q8NCN4 708 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 WHAMMQ8TF30 809 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 TRIM11Q96F44 468 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 MRPL45Q9BRJ2 306 aaKnown RBP10.15□□□□□ -0.78
PAAF1-209ENST00000540659 SELENOOQ9BVL4 669 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 TRPV6Q9H1D0 765 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 VRTNQ9H8Y1 702 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 AGO3Q9H9G7 860 aaKnown RBP10.15□□□□□ -0.78
PAAF1-209ENST00000540659 CYP3A43Q9HB55 503 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 ABCB6Q9NP58 842 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 STARD7Q9NQZ5 370 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 FAM105AQ9NUU6 356 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 ANAPC7Q9UJX3 599 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 PADI3Q9ULW8 664 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 ALG6Q9Y672 507 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 SQORQ9Y6N5 450 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 SCN1AP35498 2009 aa10.15□□□□□ -0.78
PAAF1-209ENST00000540659 TDRD15B5MCY1 1934 aaKnown RBP10.15□□□□□ -0.79
PAAF1-209ENST00000540659 M0QYV0 167 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 DNM1LO00429 736 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 DDX3YO15523 660 aaKnown RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 SPOPO43791 374 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 MGEA5O60502 916 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 CILPO75339 1184 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 PARNO95453 639 aaKnown RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 STAU1O95793 577 aaKnown RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 MYBL1P10243 752 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 SKIP12755 728 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 ATF7P17544 494 aaPredicted RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 COMTP21964 271 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 MLH1P40692 756 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 HADHBP55084 474 aaKnown RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 SOX4Q06945 474 aaPredicted RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 LPIN1Q14693 890 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 TCEAL1Q15170 157 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 FBXO47Q5MNV8 452 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 C11orf63Q6NUN7 778 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 FBXO38Q6PIJ6 1188 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 NECAB2Q7Z6G3 386 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 PDCL2Q8N4E4 241 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 TMEM35BQ8NCS4 154 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 OR6B3Q8NGW1 331 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 RABGGTAQ92696 567 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 HES6Q96HZ4 224 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 PBKQ96KB5 322 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 RPGRIP1Q96KN7 1286 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 CALR3Q96L12 384 aaKnown RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 HEXIM2Q96MH2 286 aaKnown RBP10.14□□□□□ -0.79
PAAF1-209ENST00000540659 ZFP42Q96MM3 310 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 ZNF560Q96MR9 790 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 RPS6KC1Q96S38 1066 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 ANKZF1Q9H8Y5 726 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 ERVK-5Q9HDB9 667 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 UVRAGQ9P2Y5 699 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 CACNG4Q9UBN1 327 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 PCDHGC3Q9UN70 934 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 CEP83Q9Y592 693 aa10.14□□□□□ -0.79
PAAF1-209ENST00000540659 A0A0U1RQG5 324 aaPredicted RBP10.13□□□□□ -0.79
PAAF1-209ENST00000540659 PTGESO14684 152 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 HCRTO43612 131 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 MTA2O94776 668 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 MICAL2O94851 1124 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 CD4P01730 458 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms