RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 WSCD1Q658N2 575 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 UNC13DQ70J99 1090 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 EPM2AIP1Q7L775 607 aaPredicted RBP22.61■■□□□ 1.21
CHFR-217ENST00000540537 TMC8Q8IU68 726 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 LRRC52Q8N7C0 313 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 SPRYD3Q8NCJ5 442 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 DDX23Q9BUQ8 820 aaKnown RBP22.61■■□□□ 1.21
CHFR-217ENST00000540537 LRRC3Q9BY71 257 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 PLA2G2FQ9BZM2 168 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 ZFP14Q9HCL3 533 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 ITGA11Q9UKX5 1188 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 SLC27A5Q9Y2P5 690 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 SIT1Q9Y3P8 196 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 ITGB3P05106 788 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 HOXD13P35453 343 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 DNM1Q05193 864 aaKnown RBP22.6■■□□□ 1.21
CHFR-217ENST00000540537 SNW1Q13573 536 aaKnown RBP22.6■■□□□ 1.21
CHFR-217ENST00000540537 TTC9BQ8N6N2 239 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 PJA1Q8NG27 643 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 CXorf38Q8TB03 319 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 SHKBP1Q8TBC3 707 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 ZNF507Q8TCN5 953 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 NOC3LQ8WTT2 800 aaKnown RBP22.6■■□□□ 1.21
CHFR-217ENST00000540537 C2orf15Q8WU43 125 aaKnown RBP22.6■■□□□ 1.21
CHFR-217ENST00000540537 SMARCD2Q92925 531 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 PSMG2Q969U7 264 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 GPR88Q9GZN0 384 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 TRPV4Q9HBA0 871 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 PDE11AQ9HCR9 933 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 RCOR1Q9UKL0 485 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 AGAP1Q9UPQ3 857 aa22.6■■□□□ 1.21
CHFR-217ENST00000540537 UBE4BO95155 1302 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 MIA3Q5JRA6 1907 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 PROB1E7EW31 1015 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 TULP1O00294 542 aaPredicted RBP22.59■■□□□ 1.21
CHFR-217ENST00000540537 TUFMP49411 452 aaKnown RBP22.59■■□□□ 1.21
CHFR-217ENST00000540537 EHHADHQ08426 723 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 ANGPT1Q15389 498 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 SURF1Q15526 300 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 TEAD2Q15562 447 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 ITIH5Q86UX2 942 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 DLGAP2Q9P1A6 1054 aa22.59■■□□□ 1.21
CHFR-217ENST00000540537 USP34Q70CQ2 3546 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 KANSL1LA0AUZ9 987 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 ZNF233A6NK53 670 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 FGF19O95750 216 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 TMEM191BP0C7N4 346 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 GJA1P17302 382 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 NBL1P41271 181 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 DNAJB7Q7Z6W7 309 aaPredicted RBP22.58■■□□□ 1.21
CHFR-217ENST00000540537 DCP1BQ8IZD4 617 aaKnown RBP22.58■■□□□ 1.21
CHFR-217ENST00000540537 CSGALNACT2Q8N6G5 542 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 SPPL2BQ8TCT7 592 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 DNASE1L2Q92874 299 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 ANKRD36BP1Q96IX9 119 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 ZSWIM3Q96MP5 696 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 FOXQ1Q9C009 403 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 MTMR12Q9C0I1 747 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 KIAA1586Q9HCI6 787 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 HSPBP1Q9NZL4 362 aa22.58■■□□□ 1.21
CHFR-217ENST00000540537 SOAT2O75908 522 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 DCNP07585 359 aaKnown RBP22.57■■□□□ 1.2
CHFR-217ENST00000540537 SNRPFP62306 86 aaKnown RBP22.57■■□□□ 1.2
CHFR-217ENST00000540537 RBP5P82980 135 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 BFSP1Q12934 665 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 MGAT5BQ3V5L5 792 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 LRRTM3Q86VH5 581 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 CBWD2Q8IUF1 395 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 TMEM86AQ8N2M4 240 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 PDCL2Q8N4E4 241 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 ZSCAN18Q8TBC5 510 aaPredicted RBP22.57■■□□□ 1.2
CHFR-217ENST00000540537 SEPT5Q99719 369 aaPredicted RBP22.57■■□□□ 1.2
CHFR-217ENST00000540537 OSBPL6Q9BZF3 934 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 SLITRK6Q9H5Y7 841 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 AGPAT3Q9NRZ7 376 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 INTS13Q9NVM9 706 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 GDAP2Q9NXN4 497 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 SIX4Q9UIU6 781 aa22.57■■□□□ 1.2
CHFR-217ENST00000540537 ZFHX2Q9C0A1 2572 aaPredicted RBP22.57■■□□□ 1.2
CHFR-217ENST00000540537 F5P12259 2224 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 PVALEFA0A1B0GWK0 134 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 A0A1W2PRU2 124 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 HUS1O60921 280 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 CASP1P29466 404 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 TSPY1Q01534 308 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 VEPH1Q14D04 833 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 SPATA18Q8TC71 538 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 DEPDC1BQ8WUY9 529 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 SCFD1Q8WVM8 642 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 E2F7Q96AV8 911 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 FAM84AQ96KN4 292 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 TRMT61BQ9BVS5 477 aaKnown RBP22.56■■□□□ 1.2
CHFR-217ENST00000540537 BLZF1Q9H2G9 400 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 ZNF334Q9HCZ1 680 aaPredicted RBP22.56■■□□□ 1.2
CHFR-217ENST00000540537 L1RE1Q9UN81 338 aa22.56■■□□□ 1.2
CHFR-217ENST00000540537 VPS13AQ96RL7 3174 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 MYO15AQ9UKN7 3530 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 TGFB1I1O43294 461 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 TNNC2P02585 160 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 KRT19P08727 400 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms