RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 GFRA3O60609 400 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 ECI2O75521 394 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 MICAL2O94851 1124 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 ITGB3P05106 788 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 DCNP07585 359 aaKnown RBP9.72□□□□□ -0.85
LMO3-222ENST00000540445 GJA1P17302 382 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 POLR2BP30876 1174 aaKnown RBP9.72□□□□□ -0.85
LMO3-222ENST00000540445 PNPLA4P41247 253 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 CCR2P41597 374 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 TUFMP49411 452 aaKnown RBP9.72□□□□□ -0.85
LMO3-222ENST00000540445 STARD6P59095 220 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 DNM1Q05193 864 aaKnown RBP9.72□□□□□ -0.85
LMO3-222ENST00000540445 PKP1Q13835 747 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 E2F4Q16254 413 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 TAF12Q16514 161 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 MGAT5BQ3V5L5 792 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 PRSS36Q5K4E3 855 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 WSCD1Q658N2 575 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 TANGO2Q6ICL3 276 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 CENPPQ6IPU0 288 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 ASCL5Q7RTU5 278 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 BRSK2Q8IWQ3 736 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 EFCAB13Q8IY85 973 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 CEP57L1Q8IYX8 460 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 GPD1LQ8N335 351 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 RDH13Q8NBN7 331 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 LEMD2Q8NC56 503 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 ZNF560Q96MR9 790 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 SEPT5Q99719 369 aaPredicted RBP9.72□□□□□ -0.85
LMO3-222ENST00000540445 C7orf25Q9BPX7 421 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 PLA2G2FQ9BZM2 168 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 BLZF1Q9H2G9 400 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 SLITRK6Q9H5Y7 841 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 PDE11AQ9HCR9 933 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 YIPF1Q9Y548 306 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 PTPRZ1P23471 2315 aaPredicted RBP9.72□□□□□ -0.85
LMO3-222ENST00000540445 DMXL1Q9Y485 3027 aa9.71□□□□□ -0.85
LMO3-222ENST00000540445 MTMR11A4FU01 709 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 PRR23AA6NEV1 266 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 KIAA0391O15091 583 aaKnown RBP9.71□□□□□ -0.86
LMO3-222ENST00000540445 HUS1O60921 280 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 SOAT2O75908 522 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 VNN2O95498 520 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 CYP11A1P05108 521 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 TMEM191BP0C7N4 346 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 CASP1P29466 404 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 RBP5P82980 135 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 BFSP1Q12934 665 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 ANGPT1Q15389 498 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 SURF1Q15526 300 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 TEAD2Q15562 447 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 MLF2Q15773 248 aaPredicted RBP9.71□□□□□ -0.86
LMO3-222ENST00000540445 FAM78AQ5JUQ0 283 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 FAM26FQ5R3K3 315 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 DNAJB7Q7Z6W7 309 aaPredicted RBP9.71□□□□□ -0.86
LMO3-222ENST00000540445 ITIH5Q86UX2 942 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 GPIHBP1Q8IV16 184 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 DCP1BQ8IZD4 617 aaKnown RBP9.71□□□□□ -0.86
LMO3-222ENST00000540445 GLIS3Q8NEA6 775 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 OR10T2Q8NGX3 314 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 ZNF507Q8TCN5 953 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 ELSPBP1Q96BH3 223 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 ANKRD36BP1Q96IX9 119 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 ZSWIM3Q96MP5 696 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 DDX23Q9BUQ8 820 aaKnown RBP9.71□□□□□ -0.86
LMO3-222ENST00000540445 TRMT61BQ9BVS5 477 aaKnown RBP9.71□□□□□ -0.86
LMO3-222ENST00000540445 GPR88Q9GZN0 384 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 ZCWPW1Q9H0M4 648 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 CRISPLD1Q9H336 500 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 BRD9Q9H8M2 597 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 MAGEF1Q9HAY2 307 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 RCOR1Q9UKL0 485 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 GREB1Q4ZG55 1949 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 DCHS1Q96JQ0 3298 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 F5P12259 2224 aa9.71□□□□□ -0.86
LMO3-222ENST00000540445 ZNF292O60281 2723 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 ANAPC1Q9H1A4 1944 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 ATG2BQ96BY7 2078 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 A0A1W2PRU2 124 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 KANSL1LA0AUZ9 987 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 FAM170BA6NMN3 283 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 CLIC2O15247 247 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 EIF3DO15371 548 aaKnown RBP eCLIP9.7□□□□□ -0.86
LMO3-222ENST00000540445 MOSPD3O75425 235 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 TNNC2P02585 160 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 GLULP15104 373 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 PSMC3P17980 439 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 TNNI1P19237 187 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 CD72P21854 359 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 FCARP24071 287 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 VIPR2P41587 438 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 EPHA5P54756 1037 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 WNT7BP56706 349 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 TSPY1Q01534 308 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 PRKCQQ04759 706 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 SMARCB1Q12824 385 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 MYO1EQ12965 1108 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 GRM2Q14416 872 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 UBXN2BQ14CS0 331 aa9.7□□□□□ -0.86
LMO3-222ENST00000540445 VEPH1Q14D04 833 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms