RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 HSP90AA5PQ58FG0 334 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 SYCP2LQ5T4T6 812 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 DEPDC1Q5TB30 811 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 LRRC47Q8N1G4 583 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 USP33Q8TEY7 942 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 TANGO6Q9C0B7 1094 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 CDC42EP4Q9H3Q1 356 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 TAS2R1Q9NYW7 299 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 N6AMT1Q9Y5N5 214 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 SIPA1L1O43166 1804 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 DYTNA2CJ06 578 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 CFAP69A5D8W1 941 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 PP2D1A8MPX8 630 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 F8W8V4 182 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 AP1G1O43747 822 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 CLPTM1O96005 669 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 ZBED1O96006 694 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 EEF2P13639 858 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 VCLP18206 1134 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 AP2B1P63010 937 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 DMPKQ09013 629 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 DLG1Q12959 904 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 MYLK3Q32MK0 819 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 C10orf76Q5T2E6 689 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 DCAF12L1Q5VU92 463 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 UGT2A3Q6UWM9 527 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 TMEM179Q6ZVK1 233 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 TRMT10CQ7L0Y3 403 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 HPS3Q969F9 1004 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 C18orf8Q96DM3 657 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 NSL1Q96IY1 281 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 CDK5RAP3Q96JB5 506 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 LSM14BQ9BX40 385 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 KANSL2Q9H9L4 492 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 DNAJC17Q9NVM6 304 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 TBK1Q9UHD2 729 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 ZNHIT2Q9UHR6 403 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 CCPG1Q9ULG6 757 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 PPM1HQ9ULR3 514 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 GIT1Q9Y2X7 761 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 ADGRA3Q8IWK6 1321 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 PLIN4Q96Q06 1357 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 CCDC162PA2VCL2 907 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 FUOMA2VDF0 154 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 RASA4BC9J798 803 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 RASA4O43374 803 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PHF2O75151 1096 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 HAUS5O94927 633 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 KRT13P13646 458 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PGM1P36871 562 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 CAP2P40123 477 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 NSUN2Q08J23 767 aaKnown RBP eCLIP9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 MSLNQ13421 630 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PRKG1Q13976 671 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 KRT72Q14CN4 511 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 ASIC2Q16515 512 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 METTL21CQ5VZV1 264 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 CENPPQ6IPU0 288 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 EPM2AIP1Q7L775 607 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PIP4K2CQ8TBX8 421 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 LRRC15Q8TF66 581 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 ITPKCQ96DU7 683 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 COX4I2Q96KJ9 171 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 FAM161BQ96MY7 647 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 CCT7Q99832 543 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 RNF26Q9BY78 433 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 NDEL1Q9GZM8 345 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PSTPIP2Q9H939 334 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 RRAGCQ9HB90 399 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 DNAJB4Q9UDY4 337 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 COQ6Q9Y2Z9 468 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 NOX1Q9Y5S8 564 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 NR2E3Q9Y5X4 410 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 C15orf38-AP3S2A0A0A6YYH1 394 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 ARHGAP10A1A4S6 786 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 DDAH1O94760 285 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 ABCB11O95342 1321 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PLEKHA8P1O95397 391 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PPP1R2P41236 205 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 CCT8P50990 548 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 RAP1GDS1P52306 607 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 RCAN1P53805 252 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 NPY5RQ15761 445 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 LRRC36Q1X8D7 754 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 USP17L2Q6R6M4 530 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 ARPINQ7Z6K5 226 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 LRRC6Q86X45 466 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 WDR75Q8IWA0 830 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 KIAA0895Q8NCT3 520 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 ANKK1Q8NFD2 765 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 ZC3H15Q8WU90 426 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 BHMTQ93088 406 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 NEURL2Q9BR09 285 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 TUBB6Q9BUF5 446 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 GRIP2Q9C0E4 1043 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 LRRC27Q9C0I9 530 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 SENP6Q9GZR1 1112 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 PLGRKTQ9HBL7 147 aa9.97□□□□□ -0.81
CTNNA1-243ENST00000540387 CYLDQ9NQC7 956 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms