RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ANLNQ9NQW6 1124 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 MARCOQ9UEW3 520 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-203ENST00000540357 HNRNPCP07910 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
DNMT1-203ENST00000540357 RRM1P23921 792 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 COPAP53621 1224 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 BCAR1P56945 870 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 PRPSAP1Q14558 356 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
DNMT1-203ENST00000540357 SESTD1Q86VW0 696 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 MCOLN2Q8IZK6 566 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 ALG3Q92685 438 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 POLR3FQ9H1D9 316 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-203ENST00000540357 CHST7Q9NS84 486 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 HEY1Q9Y5J3 304 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 HLA-DRAP01903 254 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 ERFP50548 548 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 JAM2P57087 298 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 CDK16Q00536 496 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 EPC2Q52LR7 807 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 TFDP3Q5H9I0 405 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 PODNQ7Z5L7 613 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 JADE3Q92613 823 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 HEXIM2Q96MH2 286 aaKnown RBP13.65□□□□□ -0.22
DNMT1-203ENST00000540357 CBWD1Q9BRT8 395 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 PCDH9Q9HC56 1237 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 PAK5Q9P286 719 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 TBX20Q9UMR3 447 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 FRMPD4Q14CM0 1322 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 HSPA13P48723 471 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 CCNHP51946 323 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-203ENST00000540357 CDC42EP5Q6NZY7 148 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 C16orf89Q6UX73 402 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 ZNF354CQ86Y25 554 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 VPS11Q9H270 941 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 G3BP2Q9UN86 482 aaKnown RBP13.64□□□□□ -0.23
DNMT1-203ENST00000540357 STXBP5LQ9Y2K9 1186 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 COL5A2P05997 1499 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-203ENST00000540357 PPP2R5CQ13362 524 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 ECM1Q16610 540 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 GSTA3Q16772 222 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 NOP9Q86U38 636 aaKnown RBP13.64□□□□□ -0.23
DNMT1-203ENST00000540357 LDHDQ86WU2 507 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 RNF34Q969K3 372 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 OXNAD1Q96HP4 312 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-203ENST00000540357 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 H0YGN5 161 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 GIPC1O14908 333 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 FSCN2O14926 492 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 GJB6O95452 261 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 SSTR3P32745 418 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-203ENST00000540357 PHEXP78562 749 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 SP8Q8IXZ3 490 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 DNAAF3Q8N9W5 541 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 OPTNQ96CV9 577 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 RMDN3Q96TC7 470 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 ARHGEF3Q9NR81 526 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 GRID1Q9ULK0 1009 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 NFS1Q9Y697 457 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 TRIM49D1C9J1S8 452 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 CST8O60676 142 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 NPR1P16066 1061 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 CDH6P55285 790 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 ZBTB17Q13105 803 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 CDO1Q16878 200 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 LMBRD2Q68DH5 695 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-203ENST00000540357 TXNRD3Q86VQ6 643 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 PCMTD2Q9NV79 361 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 GABBR1Q9UBS5 961 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 PCDHA10Q9Y5I2 948 aa13.64□□□□□ -0.23
DNMT1-203ENST00000540357 EXTL3O43909 919 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 AP1G2O75843 785 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 SPOPLQ6IQ16 392 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 CCNYQ8ND76 341 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 DDI1Q8WTU0 396 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 TRPV6Q9H1D0 765 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 SMYD2Q9NRG4 433 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 hCG_2014768A0A024R1R8 64 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 APOL1O14791 398 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 STRNO43815 780 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 DGAT1O75907 488 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 SRGAP2BP0DMP2 458 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 STIP1P31948 543 aaKnown RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 RPA3P35244 121 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 CHKAP35790 457 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 TNFAIP1Q13829 316 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 ADRM1Q16186 407 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 SPOCD1Q6ZMY3 1216 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 LRRC6Q86X45 466 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 FITM2Q8N6M3 262 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 TCP10LQ8TDR4 215 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 LZICQ8WZA0 190 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 RSAD1Q9HA92 442 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 C17orf75Q9HAS0 396 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 C4orf22Q6V702 233 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 CBWD2Q8IUF1 395 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms