RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 HNRNPLLQ8WVV9 542 aaKnown RBP23.85■■□□□ 1.41
HOMER3-204ENST00000539827 TMEM176AQ96HP8 235 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 RNPC3Q96LT9 517 aaKnown RBP23.85■■□□□ 1.41
HOMER3-204ENST00000539827 GRIN2DO15399 1336 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 SPDYE4A6NLX3 237 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 KRIT1O00522 736 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 TLR3O15455 904 aaKnown RBP23.85■■□□□ 1.41
HOMER3-204ENST00000539827 ITGA4P13612 1032 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 PTPN11Q06124 597 aaPredicted RBP23.85■■□□□ 1.41
HOMER3-204ENST00000539827 MAMLD1Q13495 774 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 PLEKHA7Q6IQ23 1121 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 SERINC5Q86VE9 423 aa23.85■■□□□ 1.41
HOMER3-204ENST00000539827 SMIM28A0A1B0GU29 152 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 MED7O43513 233 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 RPS6KA5O75582 802 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 CHRNA1P02708 482 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 HMGCRP04035 888 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 MCM3P25205 808 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 CTNNA2P26232 953 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 APLP1P51693 650 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 NDST1P52848 882 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 SMYD5Q6GMV2 418 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 GSPT2Q8IYD1 628 aaKnown RBP23.84■■□□□ 1.41
HOMER3-204ENST00000539827 ARRDC4Q8NCT1 418 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 UBQLN1Q9UMX0 589 aaKnown RBP23.84■■□□□ 1.41
HOMER3-204ENST00000539827 ST3GAL5Q9UNP4 418 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 CEP83Q9Y592 693 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 SCN1AP35498 2009 aa23.84■■□□□ 1.41
HOMER3-204ENST00000539827 MYO1FO00160 1098 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 CDH5P33151 784 aaPredicted RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 NFX1Q12986 1120 aaKnown RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 ADAT2Q7Z6V5 191 aaKnown RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 SESTD1Q86VW0 696 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 RAET1EQ8TD07 263 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 HEXIM2Q96MH2 286 aaKnown RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 ZNF518BQ9C0D4 1074 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 MRPL47Q9HD33 250 aaKnown RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 TTC7AQ9ULT0 858 aaPredicted RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 BARX2Q9UMQ3 279 aaPredicted RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 SNX9Q9Y5X1 595 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 CALB1P05937 261 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 CTNNA1P35221 906 aaKnown RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 GLE1Q53GS7 698 aaKnown RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 C9orf57Q5W0N0 161 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 CCNI2Q6ZMN8 369 aaPredicted RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 DPH6Q7L8W6 267 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 ERICH1Q86X53 443 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 CFHR5Q9BXR6 569 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 SENP6Q9GZR1 1112 aaPredicted RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 DDX20Q9UHI6 824 aaKnown RBP23.83■■□□□ 1.41
HOMER3-204ENST00000539827 PCDHA3Q9Y5H8 950 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 SCINQ9Y6U3 715 aa23.83■■□□□ 1.41
HOMER3-204ENST00000539827 SASH3O75995 380 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 CST5P28325 142 aaPredicted RBP23.82■■□□□ 1.4
HOMER3-204ENST00000539827 PTGISQ16647 500 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 CYP4A22Q5TCH4 519 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 FEZF2Q8TBJ5 459 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 MRPL45Q9BRJ2 306 aaKnown RBP23.82■■□□□ 1.4
HOMER3-204ENST00000539827 PARVAQ9NVD7 372 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 STIM2Q9P246 746 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 CYTH4Q9UIA0 394 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 CCDC66A2RUB6 948 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 RAD51CO43502 376 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 MICAL2O94851 1124 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 MYBL2P10244 700 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 THPOP40225 353 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 MGAT3Q09327 533 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 INCA1Q0VD86 236 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 PDCD11Q14690 1871 aaKnown RBP23.82■■□□□ 1.4
HOMER3-204ENST00000539827 XKR4Q5GH76 650 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 MAP3K21Q5TCX8 1036 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 DAB2IPQ5VWQ8 1189 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 OSBPL7Q9BZF2 842 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 DDX47Q9H0S4 455 aaKnown RBP23.82■■□□□ 1.4
HOMER3-204ENST00000539827 NR2E1Q9Y466 385 aa23.82■■□□□ 1.4
HOMER3-204ENST00000539827 PROSCO94903 275 aa23.81■■□□□ 1.4
HOMER3-204ENST00000539827 PYGMP11217 842 aa23.81■■□□□ 1.4
HOMER3-204ENST00000539827 VDRP11473 427 aa23.81■■□□□ 1.4
HOMER3-204ENST00000539827 LRRC52Q8N7C0 313 aa23.81■■□□□ 1.4
HOMER3-204ENST00000539827 PCSK9Q8NBP7 692 aaKnown RBP23.81■■□□□ 1.4
HOMER3-204ENST00000539827 FUT8Q9BYC5 575 aa23.81■■□□□ 1.4
HOMER3-204ENST00000539827 LHX5Q9H2C1 402 aa23.81■■□□□ 1.4
HOMER3-204ENST00000539827 GOLGA2P5Q9HBQ8 144 aa23.81■■□□□ 1.4
HOMER3-204ENST00000539827 THSD7BQ9C0I4 1608 aa23.81■■□□□ 1.4
HOMER3-204ENST00000539827 HEXIM1O94992 359 aaKnown RBP23.8■■□□□ 1.4
HOMER3-204ENST00000539827 GLI1P08151 1106 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 KCNE1P15382 129 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 SEL1L2Q5TEA6 688 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 TJP2Q9UDY2 1190 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 CCDC188H7C350 402 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 VEGFBP49765 207 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 RWDD2BP57060 319 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 RPL7AP62424 266 aaKnown RBP23.8■■□□□ 1.4
HOMER3-204ENST00000539827 SOX4Q06945 474 aaPredicted RBP23.8■■□□□ 1.4
HOMER3-204ENST00000539827 PTPN20Q4JDL3 420 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 SGO2Q562F6 1265 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 DNAJC24Q6P3W2 148 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 NT5C1AQ9BXI3 368 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 L1RE1Q9UN81 338 aa23.8■■□□□ 1.4
HOMER3-204ENST00000539827 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms