RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 DEFB128Q7Z7B8 93 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 DIS3LQ8TF46 1054 aaKnown RBP12.54□□□□□ -0.4
VTN-202ENST00000539746 STK32AQ8WU08 396 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 C2orf15Q8WU43 125 aaKnown RBP12.54□□□□□ -0.4
VTN-202ENST00000539746 CEP295NLQ96MC4 621 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
VTN-202ENST00000539746 ZMAT2Q96NC0 199 aaKnown RBP12.54□□□□□ -0.4
VTN-202ENST00000539746 APOBEC3GQ9HC16 384 aaKnown RBP12.54□□□□□ -0.4
VTN-202ENST00000539746 MAFFQ9ULX9 164 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 FAN1Q9Y2M0 1017 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 TANC1Q9C0D5 1861 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 OR6C75A6NL08 312 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 M0QZQ0 153 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 MGEA5O60502 916 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 CYP11A1P05108 521 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 ACO1P21399 889 aaKnown RBP12.53□□□□□ -0.4
VTN-202ENST00000539746 ARHGAP25P42331 645 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 BCAT1P54687 386 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 KRT17Q04695 432 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 DSC1Q08554 894 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 ASTE1Q2TB18 679 aaPredicted RBP12.53□□□□□ -0.4
VTN-202ENST00000539746 ACAD10Q6JQN1 1059 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 ELMSAN1Q6PJG2 1045 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 RAD9BQ6WBX8 426 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 SCARA5Q6ZMJ2 495 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 ZNF571Q7Z3V5 609 aaPredicted RBP12.53□□□□□ -0.4
VTN-202ENST00000539746 UBE2Q1Q7Z7E8 422 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 GLYCTKQ8IVS8 523 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 CRYBG2Q8N1P7 616 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 RFFLQ8WZ73 363 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 C18orf25Q96B23 403 aaPredicted RBP12.53□□□□□ -0.4
VTN-202ENST00000539746 PPP1R13BQ96KQ4 1090 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 SUSD3Q96L08 255 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 ZFP42Q96MM3 310 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 CHP1Q99653 195 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 ACBD6Q9BR61 282 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 GPR88Q9GZN0 384 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 WNT8AQ9H1J5 351 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 ISCUQ9H1K1 167 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 NOCTQ9UK39 431 aaKnown RBP12.53□□□□□ -0.4
VTN-202ENST00000539746 GTF3C4Q9UKN8 822 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 PCDHB12Q9Y5F1 795 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 CITO14578 2027 aa12.53□□□□□ -0.4
VTN-202ENST00000539746 CTAGE9A4FU28 777 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 TBKBP1A7MCY6 615 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 POMCP01189 267 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 WEE2P0C1S8 567 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 CETN2P41208 172 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 OR1G1P47890 313 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 CLCNKBP51801 687 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.41
VTN-202ENST00000539746 CENPCQ03188 943 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 YWHAHQ04917 246 aaPredicted RBP12.52□□□□□ -0.41
VTN-202ENST00000539746 GFPT1Q06210 699 aaPredicted RBP12.52□□□□□ -0.41
VTN-202ENST00000539746 TCEAL1Q15170 157 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 CLEC16AQ2KHT3 1053 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 SPOUT1Q5T280 376 aaKnown RBP12.52□□□□□ -0.41
VTN-202ENST00000539746 E4F1Q66K89 784 aaPredicted RBP12.52□□□□□ -0.41
VTN-202ENST00000539746 ARHGAP17Q68EM7 881 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 SPOPLQ6IQ16 392 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 GJB7Q6PEY0 223 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 LCLAT1Q6UWP7 414 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 ANKS3Q6ZW76 656 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 LIMS2Q7Z4I7 341 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 SLC47A2Q86VL8 602 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 UBR7Q8N806 425 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
VTN-202ENST00000539746 CXorf38Q8TB03 319 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 ZNF606Q8WXB4 792 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 TOP1MTQ969P6 601 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 SCLYQ96I15 445 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 SENP8Q96LD8 212 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 ZNF558Q96NG5 402 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 YME1L1Q96TA2 773 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.41
VTN-202ENST00000539746 PARVAQ9NVD7 372 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 ADAM28Q9UKQ2 775 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 STXBP5LQ9Y2K9 1186 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
VTN-202ENST00000539746 INSL6Q9Y581 213 aa12.52□□□□□ -0.41
VTN-202ENST00000539746 TRIP12Q14669 1992 aaPredicted RBP12.51□□□□□ -0.41
VTN-202ENST00000539746 A0A087X0T9 212 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
VTN-202ENST00000539746 FTLP02792 175 aaPredicted RBP12.51□□□□□ -0.41
VTN-202ENST00000539746 FAM228BP0C875 321 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 CASQ1P31415 396 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 CDH5P33151 784 aaPredicted RBP12.51□□□□□ -0.41
VTN-202ENST00000539746 SCNN1AP37088 669 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 NOP2P46087 812 aaKnown RBP12.51□□□□□ -0.41
VTN-202ENST00000539746 NDST1P52848 882 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 HADHBP55084 474 aaKnown RBP12.51□□□□□ -0.41
VTN-202ENST00000539746 WNT7BP56706 349 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 PTPN21Q16825 1174 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 OVOS1Q6IE37 1185 aa12.51□□□□□ -0.41
VTN-202ENST00000539746 TOGARAM2Q6ZUX3 1019 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms