RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	TCP11X1	B4DZS4	312 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	PRR23D1	E9PI22	279 aa	Predicted RBP	9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	MYO1C	O00159	1063 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	KIF1C	O43896	1103 aa	Known RBP	9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	PRR23D2	P0DMB1	279 aa	Predicted RBP	9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	NMT1	P30419	496 aa	Known RBP	9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	CAPZA2	P47755	286 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	WDR72	Q3MJ13	1102 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	TTLL9	Q3SXZ7	439 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	EPHA10	Q5JZY3	1008 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	PLEKHM3	Q6ZWE6	761 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	SRBD1	Q8N5C6	995 aa	Known RBP	9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	DAGLB	Q8NCG7	672 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	APBB2	Q92870	758 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	CHAMP1	Q96JM3	812 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	RBM15	Q96T37	977 aa	Known RBP eCLIP	9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	REEP2	Q9BRK0	252 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	RMND5A	Q9H871	391 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	RGL1	Q9NZL6	768 aa		9.4	□□□□□ -0.9
ECHDC2-222	ENST00000539680	GOLGA8R	I6L899	631 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	VWA5A	O00534	786 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	HOXA2	O43364	376 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PDHA1	P08559	390 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	STAG3L1	P0CL83	205 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CHN1	P15882	459 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SLC9A1	P19634	815 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	GART	P22102	1010 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ALDH1A3	P47895	512 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	KIZ	Q2M2Z5	673 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	GSPT2	Q8IYD1	628 aa	Known RBP	9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	YIPF2	Q9BWQ6	316 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ERAP1	Q9NZ08	941 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	EIF3L	Q9Y262	564 aa	Known RBP	9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PCDHB2	Q9Y5E7	798 aa		9.4	□□□□□ -0.91
ECHDC2-222	ENST00000539680	AKAP10	O43572	662 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NPM3	O75607	178 aa	Known RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	COLEC11	Q9BWP8	271 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	EPC1	Q9H2F5	836 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SNX9	Q9Y5X1	595 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NPHP3-ACAD11	A0A0J9YXS1	232 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	HEATR9	A2RTY3	570 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PRRG1	O14668	218 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CCDC159	P0C7I6	412 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	HMGCS2	P54868	508 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SESN2	P58004	480 aa	Predicted RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RUNX1T1	Q06455	604 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CNTN1	Q12860	1018 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RABL6	Q3YEC7	729 aa	Predicted RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CLEC4F	Q8N1N0	589 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TBC1D16	Q8TBP0	767 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CERK	Q8TCT0	537 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZNF473	Q8WTR7	871 aa	Known RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TFB1M	Q8WVM0	346 aa	Known RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CDK5RAP1	Q96SZ6	601 aa	Known RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NIF3L1	Q9GZT8	377 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	BATF3	Q9NR55	127 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZNF229	Q9UJW7	825 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SATB2	Q9UPW6	733 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	C17orf102	A2RUQ5	167 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	HOXC6	P09630	235 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RARB	P10826	455 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MLN	P12872	115 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	GLB1L	Q6UWU2	654 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MICALL2	Q8IY33	904 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CPA5	Q8WXQ8	436 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	HES6	Q96HZ4	224 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZNF70	Q9UC06	446 aa	Predicted RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SLC25A13	Q9UJS0	675 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DSE	Q9UL01	958 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	KIAA1257	Q9ULG3	409 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DLC1	Q96QB1	1528 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PSMD14	O00487	310 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TCF3	P15923	654 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	VCL	P18206	1134 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	GEMIN4	P57678	1058 aa	Known RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	LRRC14	Q15048	493 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TJAP1	Q5JTD0	557 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	E4F1	Q66K89	784 aa	Predicted RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TRIM65	Q6PJ69	517 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SLC44A5	Q8NCS7	719 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	VPS50	Q96JG6	964 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	EMILIN2	Q9BXX0	1053 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DCDC2	Q9UHG0	476 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CAB39	Q9Y376	341 aa	Predicted RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DAGLA	Q9Y4D2	1042 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	LRRC7	Q96NW7	1537 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	VGLL3	A8MV65	326 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	EVPLL	A8MZ36	301 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TEX33	O43247	280 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CCND1	P24385	295 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TAF6	P49848	677 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PRKCE	Q02156	737 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SF3B3	Q15393	1217 aa	Known RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PHKG1	Q16816	387 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CCDC92	Q53HC0	331 aa	Predicted RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CACHD1	Q5VU97	1274 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ICE2	Q659A1	982 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SUGP1	Q8IWZ8	645 aa	Known RBP	9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	KCNV2	Q8TDN2	545 aa		9.39	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SEPT5	Q99719	369 aa	Predicted RBP	9.39	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms