RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ERGIC2Q96RQ1 377 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TASP1Q9H6P5 420 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 NPHS2Q9NP85 383 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 PRDM5Q9NQX1 630 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TSR3Q9UJK0 312 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ESYT3A0FGR9 886 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 PSTPIP1O43586 416 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ICAM1P05362 532 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 KRT8P05787 483 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ENO1P06733 434 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 PDHA1P08559 390 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 OR1G1P47890 313 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 PPIL6Q8IXY8 311 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TEX9Q8N6V9 391 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 SLC7A14Q8TBB6 771 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ARL8AQ96BM9 186 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 SLITRK1Q96PX8 696 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 NUDT12Q9BQG2 462 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 AAASQ9NRG9 546 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 SLC4A7Q9Y6M7 1214 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 BAZ2BQ9UIF8 2168 aaKnown RBP6.77□□□□□ -1.32
LSAMP-207ENST00000539563 ANXA9O76027 345 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 C6orf222P0C671 652 aaPredicted RBP6.77□□□□□ -1.32
LSAMP-207ENST00000539563 SLC2A3P11169 496 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 NAMPTP43490 491 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 ALDH18A1P54886 795 aaKnown RBP6.77□□□□□ -1.32
LSAMP-207ENST00000539563 MTFR1Q15390 333 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 ARHGAP15Q53QZ3 475 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 GPAT2Q6NUI2 795 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 RNF180Q86T96 592 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 CATSPER3Q86XQ3 398 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 KLC4Q9NSK0 619 aa6.77□□□□□ -1.32
LSAMP-207ENST00000539563 C5orf58C9J3I9 102 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 PSMD14O00487 310 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 PPP1R37O75864 691 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ARIH2O95376 493 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 AKT1P31749 480 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 MGAT5BQ3V5L5 792 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ANGEL2Q5VTE6 544 aaKnown RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 LMBRD2Q68DH5 695 aaPredicted RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 HOMEZQ8IX15 550 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 DPF2Q92785 391 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ERP44Q9BS26 406 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 COLEC11Q9BWP8 271 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ISCUQ9H1K1 167 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 KLHL11Q9NVR0 708 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 H7C4K7 107 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 HMGB3O15347 200 aaKnown RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 NTSR2O95665 410 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 MAGEA4P43358 317 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF484Q5JVG2 852 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 DAB2IPQ5VWQ8 1189 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 PLA2G4FQ68DD2 849 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 NAPEPLDQ6IQ20 393 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 SERPINB12Q96P63 405 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 WDCPQ9H6R7 721 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 SLIT1O75093 1534 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 AGLP35573 1532 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 SPDYE5A6NIY4 337 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 C16orf96A6NNT2 1141 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 MYO1CO00159 1063 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 GPR182O15218 404 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ZSCAN9O15535 394 aaPredicted RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 CHN1P15882 459 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 PTK7Q13308 1070 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 SPDYE7PQ495Y7 208 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 TIGD7Q6NT04 549 aaPredicted RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 CEP70Q8NHQ1 597 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 METTL5Q9NRN9 209 aaKnown RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 TRAF3IP3Q9Y228 551 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 FHOD1Q9Y613 1164 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 PLA2G4AP47712 749 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 CCDC126Q96EE4 140 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF512Q96ME7 567 aaPredicted RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 WDR24Q96S15 920 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 GPR63Q9BZJ6 419 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 DPP3Q9NY33 737 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 PJA2O43164 708 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 COMTP21964 271 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 CCZ1BP86790 482 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 CCZ1P86791 482 aaPredicted RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 KLHDC7AQ5VTJ3 777 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 DACH2Q96NX9 599 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 CD274Q9NZQ7 290 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ARHGEF28Q8N1W1 1705 aaKnown RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 RASSF10A6NK89 507 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 CFAP99D6REC4 459 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 GOLGA8RI6L899 631 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 ZC3H11AO75152 810 aaKnown RBP eCLIP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 APOA1P02647 267 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 TAF6P49848 677 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 FXR1P51114 621 aaKnown RBP eCLIP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 VSNL1P62760 191 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 SFSWAPQ12872 951 aaKnown RBP6.77□□□□□ -1.33
LSAMP-207ENST00000539563 SPATA17Q96L03 361 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 AURKCQ9UQB9 309 aa6.77□□□□□ -1.33
LSAMP-207ENST00000539563 C17orf102A2RUQ5 167 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 MEFVO15553 781 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms