RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DPPA5A6NC42 116 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 MAGEB2O15479 319 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 ANO5Q75V66 913 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 NLRP9Q7RTR0 991 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 BBOF1Q8ND07 529 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 ZNF75CPQ92670 426 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-203ENST00000539559 PRR11Q96HE9 360 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-203ENST00000539559 TMEM39BQ9GZU3 492 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 PCDHB2Q9Y5E7 798 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 PTPRJQ12913 1337 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 TBC1D12O60347 775 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 WFS1O76024 890 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 TNNI1P19237 187 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 SSTR1P30872 391 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 PTDSS1P48651 473 aaKnown RBP21.42■■□□□ 1.02
TMEM260-203ENST00000539559 ACOT2P49753 483 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 CCNG1P51959 295 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 PLCB3Q01970 1234 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-203ENST00000539559 TAAR1Q96RJ0 339 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 MIPEPQ99797 713 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 ZFATQ9P243 1243 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 TCEAL9Q9UHQ7 104 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 ZFP69BQ9UJL9 534 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 EXOC7Q9UPT5 735 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 CYP1A1P04798 512 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-203ENST00000539559 NLRX1Q86UT6 975 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 KATNAL2Q8IYT4 538 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 TMEM174Q8WUU8 243 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 ST6GALNAC4Q9H4F1 302 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 CORO1CQ9ULV4 474 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-203ENST00000539559 IVNS1ABPQ9Y6Y0 642 aa21.42■■□□□ 1.02
TMEM260-203ENST00000539559 C2orf71A6NGG8 1288 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 WNT10BO00744 389 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 PRPF4O43172 522 aaKnown RBP eCLIP21.41■■□□□ 1.02
TMEM260-203ENST00000539559 PSTPIP1O43586 416 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 KRT1P04264 644 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 ALDH3A1P30838 453 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 DYNLT1P63172 113 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 GCNT1Q02742 428 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 ZNF483Q8TF39 744 aaPredicted RBP21.41■■□□□ 1.02
TMEM260-203ENST00000539559 ZBED3Q96IU2 234 aaPredicted RBP21.41■■□□□ 1.02
TMEM260-203ENST00000539559 PCDHB4Q9Y5E5 795 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 SPDYE5A6NIY4 337 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 DCTN3O75935 186 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 HLA-DRAP01903 254 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 ABHD2P08910 425 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 PIK3CAP42336 1068 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 TRAF1Q13077 416 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 KHDC1Q4VXA5 237 aaKnown RBP21.41■■□□□ 1.02
TMEM260-203ENST00000539559 RELL1Q8IUW5 271 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 ARMC2Q8NEN0 867 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 TMC2Q8TDI7 906 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 IWS1Q96ST2 819 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 APOBEC3GQ9HC16 384 aaKnown RBP21.41■■□□□ 1.02
TMEM260-203ENST00000539559 MYOZ2Q9NPC6 264 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 KANSL3Q9P2N6 904 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 ZNF536O15090 1300 aa21.41■■□□□ 1.02
TMEM260-203ENST00000539559 F8VP50 259 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 PPP1R12AO14974 1030 aaPredicted RBP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 TYROBPO43914 113 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 ERFP50548 548 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 HSD17B4P51659 736 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 GPX6P59796 221 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 NOMO3P69849 1222 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 TFDP1Q14186 410 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 TDRD10Q5VZ19 366 aaKnown RBP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 APBB1IPQ7Z5R6 666 aaPredicted RBP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 GPD1LQ8N335 351 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 METTL5Q9NRN9 209 aaKnown RBP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 SLC17A7Q9P2U7 560 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 A0A0G2JND7 137 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 TESPA1A2RU30 521 aaPredicted RBP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 WDR72Q3MJ13 1102 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 BRDTQ58F21 947 aaPredicted RBP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 LIN9Q5TKA1 542 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 DSTYKQ6XUX3 929 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 RIBC1Q8N443 379 aaPredicted RBP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 EXD1Q8NHP7 514 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 FAM81BQ96LP2 452 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 SLITRK1Q96PX8 696 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 RAVER2Q9HCJ3 691 aaKnown RBP21.4■■□□□ 1.02
TMEM260-203ENST00000539559 LRRC42Q9Y546 428 aa21.4■■□□□ 1.02
TMEM260-203ENST00000539559 A6NHS1 94 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 SGK1O00141 431 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 GNA15P30679 374 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 MSS51Q4VC12 460 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 THEMIS2Q5TEJ8 643 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 ANKRD22Q5VYY1 191 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 CLEC4DQ8WXI8 215 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 FBXL18Q96ME1 805 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 UBIAD1Q9Y5Z9 338 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 CFAP69A5D8W1 941 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 NFKBIEO00221 500 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 ATP5HO75947 161 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 PSMC5P62195 406 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 SEZ6Q53EL9 994 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 SYCP2LQ5T4T6 812 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 INPP5DQ92835 1189 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms