RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 FOXD4L3Q6VB84 417 aaPredicted RBP23.96■■□□□ 1.43
SCARB1-206ENST00000539320 FRMD5Q7Z6J6 570 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 THEM5Q8N1Q8 247 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 IQUBQ8NA54 791 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 KCNG4Q8TDN1 519 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 NOC3LQ8WTT2 800 aaKnown RBP23.96■■□□□ 1.43
SCARB1-206ENST00000539320 DNASE1L2Q92874 299 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 LRRC3Q9BY71 257 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 SLITRK6Q9H5Y7 841 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 HSFX1Q9UBD0 423 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 ASB3Q9Y575 518 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 KPNA7A9QM74 516 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 AMPD3Q01432 767 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 GRM2Q14416 872 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 TPRG1Q6ZUI0 275 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 GPD1LQ8N335 351 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 C1orf127Q8N9H9 656 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 GLIS3Q8NEA6 775 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 CACTINQ8WUQ7 758 aaKnown RBP23.95■■□□□ 1.42
SCARB1-206ENST00000539320 BORCS6Q96GS4 357 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 ZSWIM3Q96MP5 696 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 PCIF1Q9H4Z3 704 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 MAGEF1Q9HAY2 307 aa23.95■■□□□ 1.42
SCARB1-206ENST00000539320 A0A1W2PRU2 124 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 KIAA0391O15091 583 aaKnown RBP23.94■■□□□ 1.42
SCARB1-206ENST00000539320 SOAT2O75908 522 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 ITGB3P05106 788 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 UBXN2BQ14CS0 331 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 ZSCAN18Q8TBC5 510 aaPredicted RBP23.94■■□□□ 1.42
SCARB1-206ENST00000539320 DEPDC1BQ8WUY9 529 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 HPS3Q969F9 1004 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 PSMG2Q969U7 264 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 SEPT5Q99719 369 aaPredicted RBP23.94■■□□□ 1.42
SCARB1-206ENST00000539320 GPR88Q9GZN0 384 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 BRD9Q9H8M2 597 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 TRPV4Q9HBA0 871 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 LTB4R2Q9NPC1 389 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 CACNA1IQ9P0X4 2223 aa23.94■■□□□ 1.42
SCARB1-206ENST00000539320 MYO15AQ9UKN7 3530 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 PRR23AA6NEV1 266 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 EIF3DO15371 548 aaKnown RBP eCLIP23.93■■□□□ 1.421e-7■□□□□ 8.6
SCARB1-206ENST00000539320 LRRN2O75325 713 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 GLULP15104 373 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 TUFMP49411 452 aaKnown RBP23.93■■□□□ 1.42
SCARB1-206ENST00000539320 SMARCB1Q12824 385 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 FAM26FQ5R3K3 315 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 CNNM4Q6P4Q7 775 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 VITQ6UXI7 678 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 ITIH5Q86UX2 942 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 LRRC52Q8N7C0 313 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 C2orf15Q8WU43 125 aaKnown RBP23.93■■□□□ 1.42
SCARB1-206ENST00000539320 FAM84AQ96KN4 292 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 TRMT61BQ9BVS5 477 aaKnown RBP23.93■■□□□ 1.42
SCARB1-206ENST00000539320 OSBPL6Q9BZF3 934 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 PDE11AQ9HCR9 933 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 ZNF334Q9HCZ1 680 aaPredicted RBP23.93■■□□□ 1.42
SCARB1-206ENST00000539320 ITGA11Q9UKX5 1188 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 AGAP1Q9UPQ3 857 aa23.93■■□□□ 1.42
SCARB1-206ENST00000539320 USP34Q70CQ2 3546 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 TMEM191BP0C7N4 346 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 PSMC3P17980 439 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 BFSP1Q12934 665 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 VEPH1Q14D04 833 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 MGAT5BQ3V5L5 792 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 ATL3Q6DD88 541 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 ASCL5Q7RTU5 278 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 DNAJB7Q7Z6W7 309 aaPredicted RBP23.92■■□□□ 1.42
SCARB1-206ENST00000539320 SPPL2BQ8TCT7 592 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 NKD2Q969F2 451 aaPredicted RBP23.92■■□□□ 1.42
SCARB1-206ENST00000539320 BCO2Q9BYV7 579 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 MTMR12Q9C0I1 747 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 HEBP1Q9NRV9 189 aa23.92■■□□□ 1.42
SCARB1-206ENST00000539320 NCANO14594 1321 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 UBE4BO95155 1302 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 POLR2DO15514 142 aaKnown RBP23.91■■□□□ 1.42
SCARB1-206ENST00000539320 FGF19O95750 216 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 ATF6P18850 670 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 VIPR2P41587 438 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 ME1P48163 572 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 TSPY1Q01534 308 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 DCP1BQ8IZD4 617 aaKnown RBP23.91■■□□□ 1.42
SCARB1-206ENST00000539320 PDCL2Q8N4E4 241 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 FAM200AQ8TCP9 573 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 IRF7Q92985 503 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 C7orf25Q9BPX7 421 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 LPIN3Q9BQK8 851 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 ABI2Q9NYB9 513 aaPredicted RBP23.91■■□□□ 1.42
SCARB1-206ENST00000539320 FAM13BQ9NYF5 915 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 L1RE1Q9UN81 338 aa23.91■■□□□ 1.42
SCARB1-206ENST00000539320 GVINP1Q7Z2Y8 2422 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 FAM170BA6NMN3 283 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 KRT19P08727 400 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 CD72P21854 359 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 TARSP26639 723 aaKnown RBP23.9■■□□□ 1.42
SCARB1-206ENST00000539320 GDI1P31150 447 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 MAGEA9P43362 315 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 PKP1Q13835 747 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 UNC13DQ70J99 1090 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 GAREM2Q75VX8 874 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 EPM2AIP1Q7L775 607 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms