RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 COLEC11Q9BWP8 271 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 SSBP3Q9BWW4 388 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 ZNF518BQ9C0D4 1074 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 XYLT2Q9H1B5 865 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 SMOC2Q9H3U7 446 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 ETAA1Q9NY74 926 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 FAM30AQ9NZY2 134 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 LUZP4Q9P127 313 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 TMX2Q9Y320 296 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 PLEKHM1Q9Y4G2 1056 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 FAM234BA2RU67 622 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 NPEPPSL1A6NEC2 478 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 AQP12BA6NM10 295 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 CAPN14A8MX76 684 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 H7C4K7 107 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 FOXN3O00409 490 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 SH3BP5O60239 455 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 MFAP3LO75121 409 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 RASSF9O75901 435 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 RAD17O75943 681 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 ZFPL1O95159 310 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 ANXA2P07355 339 aaKnown RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 ZSCAN22P10073 491 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 TXNP10599 105 aaKnown RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 CKBP12277 381 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 GCSHP23434 173 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 KLRC1P26715 233 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 TECP42680 631 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 SCNN1GP51170 649 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 ITGA8P53708 1063 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 RNASE9P60153 205 aaKnown RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 NHLH2Q02577 135 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 KRT72Q14CN4 511 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 RALBP1Q15311 655 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 ZIK1Q3SY52 487 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 TSHZ3Q63HK5 1081 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 TAF2Q6P1X5 1199 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 Q6ZSN1 163 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 TICAM2Q86XR7 235 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 SYTL1Q8IYJ3 562 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 CFAP52Q8N1V2 620 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 MYCT1Q8N699 235 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 PSD4Q8NDX1 1056 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 MYRIPQ8NFW9 859 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 IPO4Q8TEX9 1081 aaKnown RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 ZNF483Q8TF39 744 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 ZNF566Q969W8 418 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 TMEM41AQ96HV5 264 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 TOX2Q96NM4 488 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 SLC46A1Q96NT5 459 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 SPATA5L1Q9BVQ7 753 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 HESX1Q9UBX0 185 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 ZNF212Q9UDV6 495 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 HDAC9Q9UKV0 1011 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 MAGED2Q9UNF1 606 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-210ENST00000539303 SLC30A1Q9Y6M5 507 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 FER1L4A9Z1Z3 1794 aa3.78□□□□□ -1.8
SNHG1-210ENST00000539303 MBD3L4A6NDZ8 208 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 MBD3L3A6NE82 208 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 RAB27BO00194 218 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 POLRMTO00411 1230 aaKnown RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ADAMTS3O15072 1205 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 PLA2G6O60733 806 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 PPFIA4O75335 1185 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 IPO13O94829 963 aaKnown RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 PLATP00750 562 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ANXA1P04083 346 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ELANEP08246 267 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 MYL4P12829 197 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 TYRP1P17643 537 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 PAX3P23760 479 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ALDH9A1P49189 494 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ZNF134P52741 427 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 LILRA4P59901 499 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 POU6F2P78424 691 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 HSD11B2P80365 405 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 KCNAB1Q14722 419 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 PUM3Q15397 648 aaKnown RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ZRSR2Q15696 482 aaKnown RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ARHGAP15Q53QZ3 475 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 AGAP9Q5VTM2 703 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 FAM160B1Q5W0V3 765 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 TAPT1Q6NXT6 567 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 DRICH1Q6PGQ1 229 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 USP49Q70CQ1 688 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 RNF44Q7L0R7 432 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 SGMS1Q86VZ5 419 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 SUGP1Q8IWZ8 645 aaKnown RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 NKAPQ8N5F7 415 aaKnown RBP3.77□□□□□ -1.81
SNHG1-210ENST00000539303 AOPEPQ8N6M6 819 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ATG16L2Q8NAA4 619 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 ZNF527Q8NB42 609 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 GLIS1Q8NBF1 620 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 NUP133Q8WUM0 1156 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 SPSB4Q96A44 273 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 MIEF2Q96C03 454 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 WWC2-AS2Q96NR7 200 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 GDF15Q99988 308 aa3.77□□□□□ -1.81
SNHG1-210ENST00000539303 CNPPD1Q9BV87 410 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms