RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 C2CD2Q9Y426 696 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 USP24Q9UPU5 2620 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 CACNA1IQ9P0X4 2223 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 DCDC2BA2VCK2 349 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 ZNF263O14978 683 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 LILRB5O75023 590 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 PPP1R37O75864 691 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 SOAT2O75908 522 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 FCHO2Q0JRZ9 810 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 COL9A2Q14055 689 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-206ENST00000538970 SLFN12LQ6IEE8 588 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 ARMCX5Q6P1M9 558 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 TSSK4Q6SA08 328 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 GAREM2Q75VX8 874 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 SFR1Q86XK3 245 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
VAMP1-206ENST00000538970 FAM3CQ92520 227 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 E2F7Q96AV8 911 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 HVCN1Q96D96 273 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 MKNK1Q9BUB5 465 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 ZCWPW1Q9H0M4 648 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 FBXO2Q9UK22 296 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-206ENST00000538970 AGO2Q9UKV8 859 aaKnown RBP13.54□□□□□ -0.24
VAMP1-206ENST00000538970 ASB3Q9Y575 518 aa13.54□□□□□ -0.24
VAMP1-206ENST00000538970 TICRRQ7Z2Z1 1910 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 FGF19O95750 216 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 TDGF1P13385 188 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 ADSSP30520 456 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 TAF6P49848 677 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 POU5F1Q01860 360 aaKnown RBP13.53□□□□□ -0.24
VAMP1-206ENST00000538970 SLC39A12Q504Y0 691 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 CRELD2Q6UXH1 353 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-206ENST00000538970 DYMQ7RTS9 669 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 ZNF720Q7Z2F6 126 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 DNAJB7Q7Z6W7 309 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-206ENST00000538970 ITIH5Q86UX2 942 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 EFCAB13Q8IY85 973 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 ATRIPQ8WXE1 791 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 SEPT5Q99719 369 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-206ENST00000538970 IER2Q9BTL4 223 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 STRA6Q9BX79 667 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 EPC1Q9H2F5 836 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 DPP3Q9NY33 737 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 CCDC39Q9UFE4 941 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 DSEQ9UL01 958 aa13.53□□□□□ -0.24
VAMP1-206ENST00000538970 SPTBN2O15020 2390 aa13.52□□□□□ -0.24
VAMP1-206ENST00000538970 GPR179Q6PRD1 2367 aa13.52□□□□□ -0.24
VAMP1-206ENST00000538970 MYMKA6NI61 221 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 CYB561D2O14569 222 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 CHADO15335 359 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 ATF6P18850 670 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 PDCP20941 246 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 CCNE1P24864 410 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 GABRR2P28476 465 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 MLLT6P55198 1093 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-206ENST00000538970 RESTQ13127 1097 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 MAMSTRQ6ZN01 415 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 ARID3BQ8IVW6 561 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-206ENST00000538970 YAF2Q8IY57 180 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 POMGNT1Q8WZA1 660 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 MSANTD3Q96H12 275 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 LPIN3Q9BQK8 851 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.25
VAMP1-206ENST00000538970 FAM126AQ9BYI3 521 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-206ENST00000538970 ATXN3LQ9H3M9 355 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 SEL1LQ9UBV2 794 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 SMG5Q9UPR3 1016 aaKnown RBP13.52□□□□□ -0.25
VAMP1-206ENST00000538970 SRPRBQ9Y5M8 271 aaKnown RBP13.52□□□□□ -0.25
VAMP1-206ENST00000538970 ANK1P16157 1881 aa13.52□□□□□ -0.25
VAMP1-206ENST00000538970 SLC38A8A6NNN8 435 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 IL18RAPO95256 599 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 PRAMEF12O95522 483 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 ADRB1P08588 477 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 CHRNB1P11230 501 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 TXLNAP40222 546 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 TUFMP49411 452 aaKnown RBP13.51□□□□□ -0.25
VAMP1-206ENST00000538970 WNT7BP56706 349 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 KCNA1Q09470 495 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 VEPH1Q14D04 833 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 MGAT5BQ3V5L5 792 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 L1TD1Q5T7N2 865 aaKnown RBP13.51□□□□□ -0.25
VAMP1-206ENST00000538970 GPR158Q5T848 1215 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 RRAGBQ5VZM2 374 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 WSCD1Q658N2 575 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 FAM173BQ6P4H8 233 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 C1orf228Q6PIY5 440 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 METTL23Q86XA0 190 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 NT5DC4Q86YG4 428 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 CSGALNACT1Q8TDX6 532 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 C2orf15Q8WU43 125 aaKnown RBP13.51□□□□□ -0.25
VAMP1-206ENST00000538970 DNAJC19Q96DA6 116 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 CLIC6Q96NY7 704 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 LRRC3BQ96PB8 259 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
VAMP1-206ENST00000538970 LMAN1LQ9HAT1 526 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 IL21Q9HBE4 155 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 OBP2AQ9NY56 170 aa13.51□□□□□ -0.25
VAMP1-206ENST00000538970 NCDNQ9UBB6 729 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms