RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 CCL5P13501 91 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 ACO1P21399 889 aaKnown RBP15.42■□□□□ 0.06
CDCA3-207ENST00000538862 ITGA8P53708 1063 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 PRKCEQ02156 737 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 STRN3Q13033 797 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 XRCC4Q13426 336 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 LONRF1Q17RB8 773 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 SPRED3Q2MJR0 410 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 TDRD10Q5VZ19 366 aaKnown RBP15.42■□□□□ 0.06
CDCA3-207ENST00000538862 MIS18BP1Q6P0N0 1132 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 RELL1Q8IUW5 271 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 CCDC60Q8IWA6 550 aaPredicted RBP15.42■□□□□ 0.06
CDCA3-207ENST00000538862 KATNAL2Q8IYT4 538 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 ABRAQ8N0Z2 381 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 CCDC89Q8N998 374 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 REPS2Q8NFH8 660 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 ATG4AQ8WYN0 398 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 ARHGEF2Q92974 986 aaKnown RBP15.42■□□□□ 0.06
CDCA3-207ENST00000538862 TRIM7Q9C029 511 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 AGO2Q9UKV8 859 aaKnown RBP15.42■□□□□ 0.06
CDCA3-207ENST00000538862 MYH9P35579 1960 aaKnown RBP15.42■□□□□ 0.06
CDCA3-207ENST00000538862 UMODL1Q5DID0 1318 aa15.42■□□□□ 0.06
CDCA3-207ENST00000538862 ACSL3O95573 720 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 LDHAP00338 332 aaKnown RBP15.41■□□□□ 0.06
CDCA3-207ENST00000538862 CALCAP01258 141 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 CHKAP35790 457 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 ADCY8P40145 1251 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 PIK3CAP42336 1068 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 ACTR2P61160 394 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 MLLT1Q03111 559 aaPredicted RBP15.41■□□□□ 0.06
CDCA3-207ENST00000538862 CUL2Q13617 745 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 CEP128Q6ZU80 1094 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 PHF13Q86YI8 300 aaPredicted RBP15.41■□□□□ 0.06
CDCA3-207ENST00000538862 CCDC50Q8IVM0 306 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 FUKQ8N0W3 1084 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 EXD1Q8NHP7 514 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 SOCS4Q8WXH5 440 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 USP6NLQ92738 828 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 SCLT1Q96NL6 688 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 HERPUD2Q9BSE4 406 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 FOXP3Q9BZS1 431 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 CCDC113Q9H0I3 377 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 RNF208Q9H0X6 261 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 CNTN6Q9UQ52 1028 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 SCINQ9Y6U3 715 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 IVNS1ABPQ9Y6Y0 642 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 SPATA31C2B4DYI2 1134 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 VNN1O95497 513 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 VIMP08670 466 aaKnown RBP15.41■□□□□ 0.06
CDCA3-207ENST00000538862 RALAP11233 206 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 TBXAS1P24557 533 aaPredicted RBP15.41■□□□□ 0.06
CDCA3-207ENST00000538862 NOMO3P69849 1222 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 MAMLD1Q13495 774 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 LLGL1Q15334 1064 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 GNPTABQ3T906 1256 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 SNRNP48Q6IEG0 339 aaKnown RBP15.41■□□□□ 0.06
CDCA3-207ENST00000538862 PLEKHA7Q6IQ23 1121 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 ADAM22Q9P0K1 906 aa15.41■□□□□ 0.06
CDCA3-207ENST00000538862 ZNF214Q9UL59 606 aaPredicted RBP15.41■□□□□ 0.06
CDCA3-207ENST00000538862 CHUKO15111 745 aa15.4■□□□□ 0.06
CDCA3-207ENST00000538862 THAP12O43422 761 aa15.4■□□□□ 0.06
CDCA3-207ENST00000538862 CETN2P41208 172 aa15.4■□□□□ 0.06
CDCA3-207ENST00000538862 RGS2P41220 211 aa15.4■□□□□ 0.06
CDCA3-207ENST00000538862 NLRP11P59045 1033 aaKnown RBP15.4■□□□□ 0.06
CDCA3-207ENST00000538862 C1QBPQ07021 282 aaKnown RBP15.4■□□□□ 0.06
CDCA3-207ENST00000538862 MAP2K5Q13163 448 aa15.4■□□□□ 0.06
CDCA3-207ENST00000538862 EMC2Q15006 297 aa15.4■□□□□ 0.06
CDCA3-207ENST00000538862 CRELD2Q6UXH1 353 aaPredicted RBP15.4■□□□□ 0.06
CDCA3-207ENST00000538862 SGSM3Q96HU1 749 aa15.4■□□□□ 0.06
CDCA3-207ENST00000538862 ELAC2Q9BQ52 826 aaKnown RBP15.4■□□□□ 0.06
CDCA3-207ENST00000538862 OSBPL8Q9BZF1 889 aa15.4■□□□□ 0.06
CDCA3-207ENST00000538862 R3HDM2Q9Y2K5 976 aaKnown RBP15.4■□□□□ 0.06
CDCA3-207ENST00000538862 DOCK5Q9H7D0 1870 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 HMGCRP04035 888 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 SUPT20HL2P0C7V6 817 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 ADORA2AP29274 412 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 GNA15P30679 374 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 NAMPTP43490 491 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
CDCA3-207ENST00000538862 LMNB2Q03252 620 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 GRB14Q14449 540 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 KYNUQ16719 465 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 MTERF2Q49AM1 385 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 CCDC38Q502W7 563 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
CDCA3-207ENST00000538862 CYB5D1Q6P9G0 228 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 NPLOC4Q8TAT6 608 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 DYDC1Q8WWB3 177 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 APBA2Q99767 749 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 NINJ2Q9NZG7 142 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 FLRT1Q9NZU1 646 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 LGALS13Q9UHV8 139 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 PCDHB4Q9Y5E5 795 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 TMEM120BA0PK00 339 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 SLC15A5A6NIM6 579 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 SNX3O60493 162 aa15.39■□□□□ 0.05
CDCA3-207ENST00000538862 CLTAP09496 248 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms