RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PROSCO94903 275 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 AMPD1P23109 780 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 RHOT1Q8IXI2 618 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 KATNAL2Q8IYT4 538 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 MCOLN2Q8IZK6 566 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 ADAM33Q9BZ11 813 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 FHDC1Q9C0D6 1143 aaPredicted RBP19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 HSPBP1Q9NZL4 362 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 ATXN10Q9UBB4 475 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 C6orf229H3BNL8 230 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 RTP1P59025 263 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 USH1GQ495M9 461 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 SLC30A10Q6XR72 485 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 CENPUQ71F23 418 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 FBXO11Q86XK2 927 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 DAW1Q8N136 415 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 HELQQ8TDG4 1101 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 SEMA4DQ92854 862 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 ALKBH8Q96BT7 664 aaKnown RBP19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 OLFM3Q96PB7 478 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 ECSITQ9BQ95 431 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 DDX4Q9NQI0 724 aaKnown RBP19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 DNAJB4Q9UDY4 337 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 PHF24Q9UPV7 400 aa19.58■□□□□ 0.73
SFSWAP-207ENST00000538548 UNGP13051 313 aaPredicted RBP19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 ANPEPP15144 967 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 CRABP2P29373 138 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 PRELPP51888 382 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 ALCAMQ13740 583 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 GLIS1Q8NBF1 620 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 TRIM11Q96F44 468 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 FAM161BQ96MY7 647 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 TBC1D30Q9Y2I9 924 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 NFASCO94856 1347 aa19.58■□□□□ 0.72
SFSWAP-207ENST00000538548 PENKP01210 267 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 DLDP09622 509 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 HOXA13P31271 388 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 SLFN13Q68D06 897 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 NET1Q7Z628 596 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 LRRC6Q86X45 466 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 OGFOD1Q8N543 542 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 EXD1Q8NHP7 514 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 CCDC110Q8TBZ0 833 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 ACCSQ96QU6 501 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 FNBP1Q96RU3 617 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 RANBP17Q9H2T7 1088 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 CHCHD3Q9NX63 227 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 LIASO43766 372 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 ARSEP51690 589 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 LSAMPQ13449 338 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 TRMT5Q32P41 509 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 BRWD3Q6RI45 1802 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 TMPRSS6Q8IU80 811 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 BANPQ8N9N5 519 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 STKLD1Q8NE28 680 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 OXNAD1Q96HP4 312 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 PHACTR1Q9C0D0 580 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 NDE1Q9NXR1 346 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 WRAP73Q9P2S5 460 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 SHOC2Q9UQ13 582 aa19.57■□□□□ 0.72
SFSWAP-207ENST00000538548 ARHGEF35A5YM69 484 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 PDIA2Q13087 525 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 GPS1Q13098 491 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 DLGAP5Q15398 846 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 DRICH1Q6PGQ1 229 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 MARK2Q7KZI7 788 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 PPP2R3CQ969Q6 453 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 WDR18Q9BV38 432 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 ARHGEF4Q9NR80 690 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 TMCO1Q9UM00 188 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 FCHO1O14526 889 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 NDC80O14777 642 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 AP2B1P63010 937 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 EAPPQ56P03 285 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 C6orf163Q5TEZ5 329 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 KRT39Q6A163 491 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 ADGRD1Q6QNK2 874 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 TTC7BQ86TV6 843 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 ZSWIM2Q8NEG5 633 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 MKL1Q969V6 931 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 NT5C1BQ96P26 610 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 OCEL1Q9H607 264 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 SLC17A7Q9P2U7 560 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 RABGEF1Q9UJ41 708 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 DNPEPQ9ULA0 475 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 ZNF148Q9UQR1 794 aa19.56■□□□□ 0.72
SFSWAP-207ENST00000538548 UFL1O94874 794 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 ZSCAN5DPP0CG00 497 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 MAPTP10636 758 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 PYGBP11216 843 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 GPC3P51654 580 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 TAS2R40P59535 323 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 SNAP25P60880 206 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 RNASEH2BQ5TBB1 312 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 CHSY1Q86X52 802 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 ST13P4Q8IZP2 240 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 ALLCQ8N6M5 410 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 MZB1Q8WU39 189 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 MIS12Q9H081 205 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms