RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TNIP3Q96KP6 325 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ZNF558Q96NG5 402 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SLC9A7Q96T83 725 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CHP1Q99653 195 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.37□□□□□ -0.591e-12■□□□□ 11.1
TNFRSF1A-211ENST00000538363 TMEM175Q9BSA9 504 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MED10Q9BTT4 135 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 XYLT2Q9H1B5 865 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NRDE2Q9H7Z3 1164 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 VRTNQ9H8Y1 702 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 GDAP2Q9NXN4 497 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 BARX2Q9UMQ3 279 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PCDHB12Q9Y5F1 795 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 EPN1Q9Y6I3 576 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PDCD11Q14690 1871 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SSU72P8A0A1W2PR75 194 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TMCO5BA8MYB1 307 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 I3L4J1 428 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NRP1O14786 923 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 INPPL1O15357 1258 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TLL1O43897 1013 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PAEPP09466 180 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CCDC175P0C221 793 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ATP2A2P16615 1042 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 LAG3P18627 525 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 HNRNPH3P31942 346 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MAGEA1P43355 309 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ASPAP45381 313 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 BRCC3P46736 316 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KIF11P52732 1056 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NDST1P52848 882 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 BCAR1P56945 870 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SLC8A3P57103 927 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 BMS1Q14692 1282 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SGO2Q562F6 1265 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TMEM240Q5SV17 173 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CCDC122Q5T0U0 273 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 WSCD1Q658N2 575 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SCARA3Q6AZY7 606 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TMCO2Q7Z6W1 182 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 UNC93AQ86WB7 457 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CMTR2Q8IYT2 770 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 RNPC3Q96LT9 517 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MRPL45Q9BRJ2 306 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 BCO2Q9BYV7 579 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 UBE2OQ9C0C9 1292 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 FAM124BQ9H5Z6 455 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 HESX1Q9UBX0 185 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DNAJB4Q9UDY4 337 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ADAM28Q9UKQ2 775 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 INSL6Q9Y581 213 aa11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TIMM13Q9Y5L4 95 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NT5C1B-RDH14C9J2C7 533 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TACC1O75410 805 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NDUFA10O95299 355 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SLC34A2O95436 690 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PLEKP08567 350 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 FAM163BP0C2L3 166 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 VDRP11473 427 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CYP11B1P15538 503 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ANXA13P27216 316 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PCSK1P29120 753 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CLCN1P35523 988 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PRKCIP41743 596 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SLC11A1P49279 550 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CCZ1BP86790 482 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CCZ1P86791 482 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TSPY1Q01534 308 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KRT17Q04695 432 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ORC1Q13415 861 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MEA1Q16626 185 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SOWAHAQ2M3V2 549 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TIGD5Q53EQ6 642 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 FAM171A1Q5VUB5 890 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 OVOS1Q6IE37 1185 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DPY19L2P1Q6NXN4 242 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 IRF2BP2Q7Z5L9 587 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ACOT1Q86TX2 421 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SLC47A2Q86VL8 602 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MSANTD4Q8NCY6 345 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PHOSPHO2Q8TCD6 241 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 HERVK_113Q902F9 699 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TMEM169Q96HH4 297 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PAAF1Q9BRP4 392 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MFRPQ9BY79 579 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SYNCQ9H7C4 482 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SPTLC3Q9NUV7 552 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DDX43Q9NXZ2 648 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ARHGAP20Q9P2F6 1191 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ADAMTS1Q9UHI8 967 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ZKSCAN5Q9Y2L8 839 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PDE4DIPQ5VU43 2346 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TTC3P53804 2025 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CEP290O15078 2479 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms