RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 C1orf220Q5T0J3 134 aa24.77■■□□□ 1.56
CLTA-209ENST00000538225 INTS8Q75QN2 995 aaKnown RBP24.77■■□□□ 1.56
CLTA-209ENST00000538225 TCEAL8Q8IYN2 117 aa24.77■■□□□ 1.56
CLTA-209ENST00000538225 RHOBTB2Q9BYZ6 727 aa24.77■■□□□ 1.56
CLTA-209ENST00000538225 CLSTN2Q9H4D0 955 aa24.77■■□□□ 1.56
CLTA-209ENST00000538225 C5orf42Q9H799 3197 aa24.77■■□□□ 1.56
CLTA-209ENST00000538225 PPP1R3GB7ZBB8 358 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 CLSTN1O94985 981 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 PAPLNO95428 1278 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 TRIM49P0CI25 452 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 TRIM49CP0CI26 452 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 CCNE1P24864 410 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 HOXA9P31269 272 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 PPP1R2P41236 205 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 LRRC63Q05C16 580 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 SOWAHAQ2M3V2 549 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 TMEM86AQ8N2M4 240 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 TOP6BLQ8N6T0 577 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 MMS19Q96T76 1030 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 ZCWPW1Q9H0M4 648 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 WDR6Q9NNW5 1121 aaKnown RBP24.76■■□□□ 1.55
CLTA-209ENST00000538225 DDX43Q9NXZ2 648 aaKnown RBP24.76■■□□□ 1.55
CLTA-209ENST00000538225 NR2E1Q9Y466 385 aa24.76■■□□□ 1.55
CLTA-209ENST00000538225 TSC2P49815 1807 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 IKBKBO14920 756 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 XYLBO75191 536 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 VNN2O95498 520 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 EPB41P11171 864 aaKnown RBP24.75■■□□□ 1.55
CLTA-209ENST00000538225 FKBP3Q00688 224 aaKnown RBP24.75■■□□□ 1.55
CLTA-209ENST00000538225 SLC39A12Q504Y0 691 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 RTL10Q7L3V2 364 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 GRASPQ7Z6J2 395 aaPredicted RBP24.75■■□□□ 1.55
CLTA-209ENST00000538225 ADGRF2Q8IZF7 708 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 NELFBQ8WX92 580 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 MMRN2Q9H8L6 949 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 MAFFQ9ULX9 164 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 CTNND2Q9UQB3 1225 aa24.75■■□□□ 1.55
CLTA-209ENST00000538225 C2orf16Q68DN1 1984 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 GOLGA6L22H0YM25 854 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 VNN1O95497 513 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 LRG1P02750 347 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 ACAT1P24752 427 aaKnown RBP24.74■■□□□ 1.55
CLTA-209ENST00000538225 ATICP31939 592 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 DUSP4Q13115 394 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 NCOA4Q13772 614 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 WDR72Q3MJ13 1102 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 SV2AQ7L0J3 742 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 LRRTM3Q86VH5 581 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 OSTM1Q86WC4 334 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 TRIML1Q8N9V2 468 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 ATAD1Q8NBU5 361 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 SYAP1Q96A49 352 aaPredicted RBP24.74■■□□□ 1.55
CLTA-209ENST00000538225 ELMO3Q96BJ8 720 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 MKNK1Q9BUB5 465 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 XYLT2Q9H1B5 865 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 HCFC1R1Q9NWW0 138 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 NXF1Q9UBU9 619 aaKnown RBP24.74■■□□□ 1.55
CLTA-209ENST00000538225 SLC27A5Q9Y2P5 690 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 INSL5Q9Y5Q6 135 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 CLUHO75153 1309 aa24.74■■□□□ 1.55
CLTA-209ENST00000538225 MTMR11A4FU01 709 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 C2CD4DB7Z1M9 353 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 GCLMP48507 274 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 TNNC1P63316 161 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 NTHL1P78549 312 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 ZACNQ401N2 412 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 DPH6Q7L8W6 267 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 RNF135Q8IUD6 432 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 KHSRPQ92945 711 aaKnown RBP eCLIP24.73■■□□□ 1.55
CLTA-209ENST00000538225 NUP62CLQ9H1M0 184 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 CRISPLD1Q9H336 500 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 TTC28Q96AY4 2481 aa24.73■■□□□ 1.55
CLTA-209ENST00000538225 HCRTO43612 131 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 LHX1P48742 406 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 STX17P56962 302 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 MYL7Q01449 175 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 TSPY1Q01534 308 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 PPP3CAQ08209 521 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 TWF1Q12792 350 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 ZNF699Q32M78 642 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 LIMS2Q7Z4I7 341 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 ZC3H3Q8IXZ2 948 aaKnown RBP24.72■■□□□ 1.55
CLTA-209ENST00000538225 DCP1BQ8IZD4 617 aaKnown RBP24.72■■□□□ 1.55
CLTA-209ENST00000538225 TDRD5Q8NAT2 981 aaKnown RBP24.72■■□□□ 1.55
CLTA-209ENST00000538225 DUSP9Q99956 384 aaKnown RBP24.72■■□□□ 1.55
CLTA-209ENST00000538225 ACBD6Q9BR61 282 aa24.72■■□□□ 1.55
CLTA-209ENST00000538225 DNMT3BQ9UBC3 853 aaKnown RBP24.72■■□□□ 1.55
CLTA-209ENST00000538225 GABRDO14764 452 aa24.71■■□□□ 1.55
CLTA-209ENST00000538225 STAU1O95793 577 aaKnown RBP24.71■■□□□ 1.55
CLTA-209ENST00000538225 TTI2Q6NXR4 508 aa24.71■■□□□ 1.55
CLTA-209ENST00000538225 OTOP3Q7RTS5 596 aa24.71■■□□□ 1.55
CLTA-209ENST00000538225 TTC9BQ8N6N2 239 aa24.71■■□□□ 1.55
CLTA-209ENST00000538225 SPATA18Q8TC71 538 aa24.71■■□□□ 1.55
CLTA-209ENST00000538225 GPT2Q8TD30 523 aa24.71■■□□□ 1.55
CLTA-209ENST00000538225 KBTBD7Q8WVZ9 684 aa24.71■■□□□ 1.55
CLTA-209ENST00000538225 MRPL45Q9BRJ2 306 aaKnown RBP24.71■■□□□ 1.55
CLTA-209ENST00000538225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.71■■□□□ 1.55
CLTA-209ENST00000538225 USTQ9Y2C2 406 aa24.71■■□□□ 1.55
CLTA-209ENST00000538225 BICDL2A1A5D9 508 aa24.7■■□□□ 1.54
CLTA-209ENST00000538225 SLC16A3O15427 465 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms