RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 USH1CQ9Y6N9 552 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 COL22A1Q8NFW1 1626 aaPredicted RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 TMEM150BA6NC51 233 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 F8W8V4 182 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 SNX2O60749 519 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 CYP11B1P15538 503 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 EPHX2P34913 555 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 OR1G1P47890 313 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 HERVK_113P62684 666 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 SV2CQ496J9 727 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 ACAD11Q709F0 780 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 KCNK18Q7Z418 384 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 DNAAF5Q86Y56 855 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 ELMOD1Q8N336 334 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 SLC7A14Q8TBB6 771 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 RMDN2Q96LZ7 410 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 UPF3AQ9H1J1 476 aaKnown RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 AGO4Q9HCK5 861 aaKnown RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 METTL5Q9NRN9 209 aaKnown RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 MOSPD1Q9UJG1 213 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 CFAP69A5D8W1 941 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 E5RI56 91 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 MAP3K6O95382 1288 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 GPD1P21695 349 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 RRM1P23921 792 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 GCKP35557 465 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 TAF6P49848 677 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 RAD51Q06609 339 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 MAP1SQ66K74 1059 aaPredicted RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 MMGT1Q8N4V1 131 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 DDX27Q96GQ7 796 aaKnown RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 SMYD3Q9H7B4 428 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 BLOC1S4Q9NUP1 217 aa10.56□□□□□ -0.72
GGA3-201ENST00000537686 DMGDHQ9UI17 866 aaKnown RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 TSR3Q9UJK0 312 aaKnown RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 UBQLN1Q9UMX0 589 aaKnown RBP10.56□□□□□ -0.72
GGA3-201ENST00000537686 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 TTC36A6NLP5 189 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 TCP11X1B4DZS4 312 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 H3BRB1 525 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 EML1O00423 815 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 AGTP01019 485 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 VTNP04004 478 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 PEX19P40855 299 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 SARSP49591 514 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 GTF2A2P52657 109 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 TAF11Q15544 211 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 E2F4Q16254 413 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 GOLGA7BQ2TAP0 167 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 SAMD3Q8N6K7 520 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 RUBCNQ92622 972 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 ZIM3Q96PE6 472 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 TPX2Q9ULW0 747 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 KBTBD13C9JR72 458 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 F8VZ95 297 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 VWA5AO00534 786 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 SLITRK3O94933 977 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 LUC7L3O95232 432 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 SKIP12755 728 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 ACO1P21399 889 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 HSPA9P38646 679 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 GCLCP48506 637 aaPredicted RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 MORF4L2Q15014 288 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 FSCBQ5H9T9 825 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 METTL7BQ6UX53 244 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 OTOP1Q7RTM1 612 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 ZNF571Q7Z3V5 609 aaPredicted RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 ANKRD7Q92527 254 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 KLF6Q99612 283 aaPredicted RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 OSGEPQ9NPF4 335 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.55□□□□□ -0.72
GGA3-201ENST00000537686 FAM8A1Q9UBU6 413 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 XPO7Q9UIA9 1087 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 SIPA1L3O60292 1781 aaPredicted RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 GLI3P10071 1580 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 A0A087WZ62 844 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 KLRG2A4D1S0 409 aaPredicted RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 ZBTB39O15060 712 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 TRPA1O75762 1119 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 FAM200BP0CF97 657 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 MDH1P40925 334 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 ACADSBP45954 432 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 ITGA8P53708 1063 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 SLC29A2Q14542 456 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 PGM5Q15124 567 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 MPZL3Q6UWV2 235 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 ACOT1Q86TX2 421 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 ATG4AQ8WYN0 398 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 CYFIP2Q96F07 1278 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 ZSWIM1Q9BR11 485 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 FDXACB1Q9BRP7 624 aaPredicted RBP10.55□□□□□ -0.72
GGA3-201ENST00000537686 FAM198AQ9UFP1 575 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 USP20Q9Y2K6 914 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 ADAMTS7Q9UKP4 1686 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 ABCA3Q99758 1704 aa10.55□□□□□ -0.72
GGA3-201ENST00000537686 NUP98P52948 1817 aa10.54□□□□□ -0.72
GGA3-201ENST00000537686 GSTA4O15217 222 aa10.54□□□□□ -0.72
GGA3-201ENST00000537686 NCAM1P13591 858 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms