RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ANKFY1Q9P2R3 1169 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 UVRAGQ9P2Y5 699 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 TTLL3Q9Y4R7 772 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 ZBED1O96006 694 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 KCNA2P16389 499 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 CDH3P22223 829 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 KLRK1P26718 216 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 HNRNPDQ14103 355 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 LRP10Q7Z4F1 713 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 C11orf74Q86VG3 221 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 TBC1D10CQ8IV04 446 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 MORC4Q8TE76 937 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 GLG1Q92896 1179 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 MRPL1Q9BYD6 325 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 TRIM55Q9BYV6 548 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 GRIP2Q9C0E4 1043 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 GOLPH3Q9H4A6 298 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 C15orf38-AP3S2A0A0A6YYH1 394 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 VILLO15195 856 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 GDF11O95390 407 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 TKTP29401 623 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 NBPF12Q5TAG4 269 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 ARPINQ7Z6K5 226 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 CCDC105Q8IYK2 499 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 C10orf82Q8WW14 230 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 NSMCE3Q96MG7 304 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 ZSCAN10Q96SZ4 725 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 TBK1Q9UHD2 729 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 PFASO15067 1338 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 ADGRA3Q8IWK6 1321 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 C5P01031 1676 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 GSTTP1A0A1W2PQM5 241 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 hCG_1642624A0A1W2PR95 340 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 C19orf81C9J6K1 198 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 EDF1O60869 148 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 APOEP02649 317 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 CASP7P55210 303 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 USP17L2Q6R6M4 530 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 CYFIP1Q7L576 1253 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 STARD8Q92502 1023 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 HEPHQ9BQS7 1158 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 OSBPL6Q9BZF3 934 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 NPHS2Q9NP85 383 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 ZDHHC7Q9NXF8 308 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 RRN3Q9NYV6 651 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 FBXO9Q9UK97 447 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 CYP2D7A0A087X1C5 515 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 MAGEB2O15479 319 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 VCLP18206 1134 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 NOP14P78316 857 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 MOGSQ13724 837 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 RRP1BQ14684 758 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 CYTH1Q15438 398 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 NADK2Q4G0N4 442 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 DNAL1Q4LDG9 190 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 ZDHHC24Q6UX98 284 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 TMEM179Q6ZVK1 233 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 PDSS2Q86YH6 399 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 ERI1Q8IV48 349 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 ENAHQ8N8S7 591 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 MRPL46Q9H2W6 279 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 SCAF8Q9UPN6 1271 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 DOLKQ9UPQ8 538 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 SMG5Q9UPR3 1016 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 GNA11P29992 359 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 FOXN2P32314 431 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 BCAP31P51572 246 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 SEL1L2Q5TEA6 688 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 ALKBH5Q6P6C2 394 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 PPP1R14CQ8TAE6 165 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 EME1Q96AY2 570 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 MTBPQ96DY7 904 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 TTC25Q96NG3 672 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 MRIQ9BWK5 157 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 DNAJC17Q9NVM6 304 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 GIN1Q9NXP7 522 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 N6AMT1Q9Y5N5 214 aa11.43□□□□□ -0.58
CLSTN3-207ENST00000537408 CCDC85CA6NKD9 419 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 MAGEC1O60732 1142 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 TMED2Q15363 201 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 AAGABQ6PD74 315 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 LRRC57Q8N9N7 239 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 CDC42EP4Q9H3Q1 356 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 KCNQ5Q9NR82 932 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 HOXC10Q9NYD6 342 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 KCNH4Q9UQ05 1017 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 ITGB4P16144 1822 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 FKTNO75072 461 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 NR1H2P55055 460 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 NPEPPSP55786 919 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 FCGRTP55899 365 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms